Count a file as deleted only if the previous snapshot of its name had it (closes #304)

A backup counted as deleted every file in the local index under the
source path that the walk did not find. That took in files the
snapshot excludes but another snapshot backs up, and files removed long
ago, which every later backup, and the first backup of another name
over the same path, reported as deleted again.

The backup now looks up the most recent completed snapshot of the same
name and counts only the files it lists that the walk did not find. A
file that is excluded, or inside an excluded directory, is not counted.

The snapshots row stores no deleted figure; only the backup's output
changes.

Model: opus-5-5

ARCHITECTURE.md

@@ -279,8 +279,8 @@ Key methods:
 - `Scan(ctx, path, snapshotID)` → Main scan operation
 
 Scan phases:
-1. **Phase 0**: Detect deleted files from previous snapshots
-2. **Phase 1**: Walk directory, identify files needing processing
+1. **Phase 1**: Walk directory, identify files needing processing
+2. **Phase 1b**: Count as deleted the files that the previous snapshot of the same name lists and the walk did not find; a file that is excluded, or inside an excluded directory, is not counted
 3. **Phase 2**: Process files (chunk → pack → upload)
 
 #### SnapshotManager
@@ -320,13 +320,13 @@ CreateSnapshot(opts)
     │       │
     │       ├─► scanner.Scan(ctx, path, snapshotID)
     │       │       │
-    │       │       ├─► Phase 0: detectDeletedFiles()
-    │       │       │
     │       │       ├─► Phase 1: scanPhase()
     │       │       │       Walk directory
     │       │       │       Check file metadata changes
     │       │       │       Build list of files to process
     │       │       │
+    │       │       ├─► Phase 1b: detectDeletedFiles()
+    │       │       │
     │       │       └─► Phase 2: processPhase()
     │       │               For each file:
     │       │                   chunker.ChunkReaderStreaming()

README.md

@@ -293,8 +293,8 @@ needed.
 **`snapshot list`**: Show every snapshot known to this host — the union
 of the local index and the backup destination store — with timestamps
 and three sizes per snapshot (compressed remote size; total
-uncompressed chunk size; size of the chunks that snapshot stored that
-were not stored before, recorded when its backup ran).
+uncompressed chunk size; size of chunks newly referenced by that
+snapshot).
 
 Listing the destination store does **not** require the age secret key,
 so it works in vaultik's intended configuration, where the backed-up
@@ -307,8 +307,8 @@ only the hash, so hostname and snapshot name exist solely in the local
 index and in the encrypted per-snapshot database. Snapshots found only
 on the destination store are therefore listed as
 `<remote only:<abbreviated remote key>>` and show `<remote only>` in
-the uncompressed and "new chunk" columns, which come only from the
-local index. Their timestamp and compressed size are real,
+the uncompressed and "new chunk" columns, which can only be computed
+from the local index. Their timestamp and compressed size are real,
 read from the manifest.
 
 Snapshots in the local index with no counterpart on the destination
@@ -433,10 +433,7 @@ object store. Credentials are read from `s3.access_key_id` and
 `s3.secret_access_key` in the config file.
 
 **Local filesystem** (`file:///path/to/backup`): Stores blobs and metadata on
-a local or mounted filesystem. Useful for testing or backing up to a NAS. The
-path must be absolute; a relative one is refused when the config loads.
-Percent-escapes in the path are decoded, so `my%20stick` and `my stick` name
-the same directory.
+a local or mounted filesystem. Useful for testing or backing up to a NAS.
 
 **Rclone** (`rclone://remote/path`): Uses rclone's 70+ supported cloud
 providers. Requires rclone to be configured separately (`rclone config`).

docs/DATAMODEL.md

@@ -119,7 +119,6 @@ Tracks backup snapshots.
 - `completed_at` (INTEGER) - Completion timestamp (NULL if in progress)
 - `file_count` (INTEGER) - Number of files in snapshot
 - `chunk_count` (INTEGER) - Number of chunks this snapshot stored that were not stored before
-- `new_chunk_size` (INTEGER) - Total size of those chunks before compression; `snapshot list` shows it as NEW CHUNK SIZE
 - `blob_count` (INTEGER) - Number of blobs this snapshot created
 - `total_size` (INTEGER) - Total size of all files
 - `blob_size` (INTEGER) - Total compressed size of all referenced blobs

internal/cli/config.go

@@ -251,12 +251,6 @@ func NewConfigCommand() *cobra.Command {
 		Use:   "config",
 		Short: "Manage the configuration file",
 		Long:  "Commands for creating, editing, and querying the vaultik config file.",
-		// cobra checks Args only on a command that has a Run: without
-		// one, a mistyped subcommand printed help and exited 0.
-		Args: cobra.NoArgs,
-		Run: func(cmd *cobra.Command, _ []string) {
-			_ = cmd.Help()
-		},
 	}
 
 	cmd.AddCommand(newConfigInitCommand())

internal/cli/database.go

@@ -15,12 +15,6 @@ func NewDatabaseCommand() *cobra.Command {
 		Use:   "database",
 		Short: "Manage the local state database",
 		Long:  `Commands for managing the local SQLite state database.`,
-		// cobra checks Args only on a command that has a Run: without
-		// one, a mistyped subcommand printed help and exited 0.
-		Args: cobra.NoArgs,
-		Run: func(cmd *cobra.Command, _ []string) {
-			_ = cmd.Help()
-		},
 	}
 
 	cmd.AddCommand(

internal/cli/entry_unknown_subcommand_test.go

@@ -1,43 +0,0 @@
-package cli //nolint:testpackage // shares runEntry and the command-word constants
-
-import (
-	"testing"
-
-	"github.com/stretchr/testify/assert"
-)
-
-// TestEntryGroupRejectsUnknownSubcommand runs each group command with a
-// mistyped subcommand, as a crontab line might carry one. It must fail
-// with exit 1 and name the word, as `vaultik bogus` does at the top
-// level, instead of printing the group's help and exiting 0 having done
-// nothing. The group name alone still prints its help.
-//
-//nolint:paralleltest // replaces os.Args, os.Stdout and os.Stderr
-func TestEntryGroupRejectsUnknownSubcommand(t *testing.T) {
-	for _, testCase := range []struct {
-		group    string
-		mistyped string
-	}{
-		{group: cmdSnapshot, mistyped: "craete"},
-		{group: "config", mistyped: "inti"},
-		{group: cmdRemote, mistyped: "ifno"},
-		{group: "database", mistyped: "delte"},
-		{group: "completion", mistyped: "nosuchshell"},
-	} {
-		t.Run(testCase.group, func(t *testing.T) {
-			code, stdout, stderr := runEntry(t,
-				testCase.group, testCase.mistyped)
-
-			assert.Equal(t, 1, code)
-			assert.Empty(t, stdout)
-			assert.Contains(t, stderr,
-				`unknown command "`+testCase.mistyped+`"`)
-
-			code, stdout, _ = runEntry(t, testCase.group)
-
-			assert.Equal(t, 0, code)
-			assert.Contains(t, stdout,
-				programName+" "+testCase.group+" [command]")
-		})
-	}
-}

internal/cli/remote.go

@@ -18,12 +18,6 @@ func NewRemoteCommand() *cobra.Command {
 		Use:   "remote",
 		Short: "Remote storage management commands",
 		Long:  "Commands for inspecting and managing remote storage",
-		// cobra checks Args only on a command that has a Run: without
-		// one, a mistyped subcommand printed help and exited 0.
-		Args: cobra.NoArgs,
-		Run: func(cmd *cobra.Command, _ []string) {
-			_ = cmd.Help()
-		},
 	}
 
 	// Add subcommands

internal/cli/root.go

@@ -74,21 +74,6 @@ on the source system.`,
 		NewDatabaseCommand(),
 	)
 
-	// cobra adds the completion command only when Execute runs, and with
-	// no Run, so it skipped its own cobra.NoArgs and a mistyped shell name
-	// printed help and exited 0. Adding it here lets it have a Run. Its
-	// scripts go to os.Stdout as it is now: a later SetOut does not
-	// redirect them.
-	cmd.InitDefaultCompletionCmd()
-
-	for _, sub := range cmd.Commands() {
-		if sub.Name() == "completion" {
-			sub.Run = func(completion *cobra.Command, _ []string) {
-				_ = completion.Help()
-			}
-		}
-	}
-
 	return cmd
 }
 

internal/cli/snapshot.go

@@ -41,12 +41,6 @@ func NewSnapshotCommand() *cobra.Command {
 		Use:   "snapshot",
 		Short: "Snapshot management commands",
 		Long:  "Commands for creating, listing, and managing snapshots",
-		// cobra checks Args only on a command that has a Run: without
-		// one, a mistyped subcommand printed help and exited 0.
-		Args: cobra.NoArgs,
-		Run: func(cmd *cobra.Command, _ []string) {
-			_ = cmd.Help()
-		},
 	}
 
 	// Add subcommands

internal/config/config.go

@@ -61,9 +61,6 @@ var (
 	errBadS3PartSize    = errors.New("s3.part_size must be between 5MiB and 5GiB")
 	errBadStorageScheme = errors.New(
 		"storage_url must start with s3://, file://, or rclone://")
-	errFileURLNotAbsolute = errors.New(
-		"a file:// storage_url needs an absolute path, " +
-			"as in file:///path/to/backup")
 	errStorageNotConfigured = errors.New(
 		"storage not configured; set storage_url or provide s3.endpoint + " +
 			"s3.bucket + credentials")
@@ -464,18 +461,11 @@ func (c *Config) validateStorage() error {
 
 // validateStorageURL validates URL-based storage configuration. File and
 // rclone URLs need no credentials; S3 URLs require the legacy s3.*
-// credential fields. A file URL must name an absolute path: a relative one
-// would resolve against the working directory, so the destination would
-// move with it.
+// credential fields.
 func (c *Config) validateStorageURL() error {
 	switch {
 	case strings.HasPrefix(c.StorageURL, "file://"):
-		// storage.ParseStorageURL applies the same rule, but config
-		// cannot import storage, which imports config.
-		if !strings.HasPrefix(c.StorageURL, "file:///") {
-			return errFileURLNotAbsolute
-		}
-
+		// File storage doesn't need S3 credentials
 		return nil
 	case strings.HasPrefix(c.StorageURL, "rclone://"):
 		// Rclone storage uses rclone's own config

internal/config/config_test.go

@@ -337,35 +337,6 @@ func TestLoadS3PartSize(t *testing.T) {
 	})
 }
 
-// TestLoadRejectsRelativeFileURL checks that a file:// storage_url with a
-// relative path fails at load. Accepted, it would resolve against the
-// working directory, so a backup run from another directory would write
-// to a different destination and still succeed.
-func TestLoadRejectsRelativeFileURL(t *testing.T) {
-	t.Parallel()
-
-	const relativeConfig = "snapshots:\n" +
-		"  test:\n" +
-		"    paths: [/tmp/vaultik-test-source]\n" +
-		"storage_url: file://dest\n"
-
-	path := filepath.Join(t.TempDir(), "config.yml")
-
-	err := os.WriteFile(path, []byte(relativeConfig), 0o600)
-	if err != nil {
-		t.Fatalf("write config: %v", err)
-	}
-
-	_, err = Load(path)
-	if !errors.Is(err, errFileURLNotAbsolute) {
-		t.Fatalf("Load() error = %v, want errFileURLNotAbsolute", err)
-	}
-
-	if !strings.Contains(err.Error(), "absolute path") {
-		t.Errorf("error %q does not say to use an absolute path", err.Error())
-	}
-}
-
 // TestValidateAgeRecipients checks that recipients are parsed at config load
 // (a bad entry fails immediately, not mid-backup) and that no invalid entry —
 // least of all a pasted secret key — is echoed in the error. An empty list

internal/database/files.go

@@ -277,6 +277,50 @@ func (r *FileRepository) ListUnderPath(
 	return files, rows.Err()
 }
 
+// ListUnderPathInSnapshot returns the files that ListUnderPath returns
+// for path and that the snapshot lists, in no particular order.
+func (r *FileRepository) ListUnderPathInSnapshot(
+	ctx context.Context, path, snapshotID string,
+) ([]*File, error) {
+	path = strings.TrimRight(path, "/")
+	dirPrefix := path + "/"
+
+	query := `
+		SELECT f.id, f.path, f.source_path, f.mtime, f.mtime_nsec, f.size,
+			f.mode, f.uid, f.gid, f.link_target
+		FROM files f
+		JOIN snapshot_files sf ON sf.file_id = f.id
+		WHERE sf.snapshot_id = ?
+		  AND (f.path = ? OR substr(f.path, 1, length(?)) = ?)
+	`
+
+	rows, err := r.db.conn.QueryContext(ctx, query,
+		snapshotID, path, dirPrefix, dirPrefix)
+	if err != nil {
+		return nil, fmt.Errorf("querying files: %w", err)
+	}
+
+	defer func() {
+		err := rows.Close()
+		if err != nil {
+			Fatalf("failed to close rows: %v", err)
+		}
+	}()
+
+	var files []*File
+
+	for rows.Next() {
+		file, err := r.scanFileRows(rows)
+		if err != nil {
+			return nil, fmt.Errorf("scanning file: %w", err)
+		}
+
+		files = append(files, file)
+	}
+
+	return files, rows.Err()
+}
+
 // ListIDsWithChunksNotInUploadedBlobs returns the IDs of the files whose
 // path starts with prefix and that list at least one chunk held by no
 // blob whose upload has completed (uploaded_ts set). A new snapshot

internal/database/files_test.go

@@ -212,6 +212,65 @@ func TestFileRepositoryListUnderPath(t *testing.T) {
 	}
 }
 
+// ListUnderPathInSnapshot leaves out files outside path and files the
+// snapshot does not list, though another snapshot lists them.
+func TestFileRepositoryListUnderPathInSnapshot(t *testing.T) {
+	t.Parallel()
+
+	db, cleanup := setupTestDB(t)
+	defer cleanup()
+
+	ctx := context.Background()
+	files := database.NewFileRepository(db)
+	snapshots := database.NewSnapshotRepository(db)
+
+	listed := map[string][]string{
+		"one": {"/src/a.txt", "/src2/c.txt"},
+		"two": {"/src/b.txt"},
+	}
+
+	for snapshotID, paths := range listed {
+		err := snapshots.Create(ctx, nil, &database.Snapshot{
+			ID:        types.SnapshotID(snapshotID),
+			Hostname:  "host",
+			StartedAt: time.Now(),
+		})
+		if err != nil {
+			t.Fatalf("failed to create snapshot %s: %v", snapshotID, err)
+		}
+
+		for _, path := range paths {
+			err := files.Create(ctx, nil, &database.File{
+				Path:  types.FilePath(path),
+				MTime: time.Now().Truncate(time.Second),
+				Mode:  0644,
+			})
+			if err != nil {
+				t.Fatalf("failed to create %s: %v", path, err)
+			}
+
+			err = snapshots.AddFile(ctx, nil, snapshotID, path)
+			if err != nil {
+				t.Fatalf("failed to add %s to %s: %v", path, snapshotID, err)
+			}
+		}
+	}
+
+	found, err := files.ListUnderPathInSnapshot(ctx, "/src", "one")
+	if err != nil {
+		t.Fatalf("failed to list files: %v", err)
+	}
+
+	got := make([]string, 0, len(found))
+	for _, f := range found {
+		got = append(got, f.Path.String())
+	}
+
+	if !slices.Equal(got, []string{"/src/a.txt"}) {
+		t.Errorf("got %q, want only /src/a.txt", got)
+	}
+}
+
 func TestFileRepositorySymlink(t *testing.T) {
 	t.Parallel()
 

internal/database/repositories.go

@@ -3,7 +3,6 @@ package database
 import (
 	"context"
 	"database/sql"
-	"errors"
 	"fmt"
 )
 
@@ -61,24 +60,22 @@ func (r *Repositories) WithTx(ctx context.Context, fn TxFunc) error {
 
 	defer func() {
 		if p := recover(); p != nil {
-			// The panic is the failure to report, so a rollback error
-			// is dropped.
-			_ = tx.Rollback()
+			rollbackErr := tx.Rollback()
+			if rollbackErr != nil {
+				Fatalf("failed to rollback transaction: %v", rollbackErr)
+			}
 
 			panic(p)
+		} else if err != nil {
+			rollbackErr := tx.Rollback()
+			if rollbackErr != nil {
+				Fatalf("failed to rollback transaction: %v", rollbackErr)
+			}
 		}
 	}()
 
 	err = fn(ctx, tx)
 	if err != nil {
-		// Once ctx is cancelled, database/sql rolls the transaction
-		// back itself and Rollback returns sql.ErrTxDone.
-		rollbackErr := tx.Rollback()
-		if rollbackErr != nil && !errors.Is(rollbackErr, sql.ErrTxDone) {
-			return fmt.Errorf("%w; rolling back transaction: %w",
-				err, rollbackErr)
-		}
-
 		return err
 	}
 

internal/database/repositories_test.go

@@ -4,7 +4,6 @@ import (
 	"context"
 	"database/sql"
 	"errors"
-	"strings"
 	"testing"
 	"time"
 
@@ -236,125 +235,6 @@ func TestRepositoriesTransactionRollback(t *testing.T) {
 	}
 }
 
-// When the context is cancelled during the body, database/sql rolls the
-// transaction back itself, so WithTx's own rollback finds it already
-// done. WithTx must return the body's error alone, without that rollback.
-func TestRepositoriesTransactionContextCancelled(t *testing.T) {
-	t.Parallel()
-
-	db, cleanup := setupTestDB(t)
-	defer cleanup()
-
-	ctx, cancel := context.WithCancel(context.Background())
-	defer cancel()
-
-	repos := database.NewRepositories(db)
-
-	err := repos.WithTx(ctx, func(ctx context.Context, tx *sql.Tx) error {
-		file := &database.File{
-			Path:  "/test/cancelled_file.txt",
-			MTime: time.Now().Truncate(time.Second),
-			Size:  1024,
-			Mode:  0644,
-			UID:   1000,
-			GID:   1000,
-		}
-
-		err := repos.Files.Create(ctx, tx, file)
-		if err != nil {
-			return err
-		}
-
-		cancel()
-
-		// database/sql rolls back from a goroutine of its own; wait
-		// until it has, so the test does not depend on that race.
-		for {
-			_, err = tx.ExecContext(context.WithoutCancel(ctx), "SELECT 1")
-			if errors.Is(err, sql.ErrTxDone) {
-				return ctx.Err()
-			}
-
-			time.Sleep(time.Millisecond)
-		}
-	})
-	if !errors.Is(err, context.Canceled) {
-		t.Fatalf("expected context.Canceled, got: %v", err)
-	}
-
-	if errors.Is(err, sql.ErrTxDone) {
-		t.Fatalf("the already-done rollback was reported: %v", err)
-	}
-
-	file, err := repos.Files.GetByPath(
-		context.Background(), "/test/cancelled_file.txt",
-	)
-	if err != nil {
-		t.Fatalf("error checking for file: %v", err)
-	}
-
-	if file != nil {
-		t.Error("file should not exist after the cancelled transaction")
-	}
-}
-
-// A body that ends the transaction itself with ROLLBACK makes WithTx's
-// own rollback fail. WithTx must return that failure together with the
-// body's error.
-func TestRepositoriesTransactionRollbackFails(t *testing.T) {
-	t.Parallel()
-
-	db, cleanup := setupTestDB(t)
-	defer cleanup()
-
-	ctx := context.Background()
-	repos := database.NewRepositories(db)
-
-	err := repos.WithTx(ctx, func(ctx context.Context, tx *sql.Tx) error {
-		_, err := tx.ExecContext(ctx, "ROLLBACK")
-		if err != nil {
-			return err
-		}
-
-		return errIntentionalRollback
-	})
-	if !errors.Is(err, errIntentionalRollback) {
-		t.Fatalf("expected the body's error, got: %v", err)
-	}
-
-	if !strings.Contains(err.Error(), "rolling back transaction") {
-		t.Errorf("expected the failed rollback in the error, got: %v", err)
-	}
-}
-
-// When the body ends the transaction itself with ROLLBACK and then
-// panics, WithTx's own rollback fails; the panic must still reach the
-// caller.
-func TestRepositoriesTransactionPanicRollbackFails(t *testing.T) {
-	t.Parallel()
-
-	db, cleanup := setupTestDB(t)
-	defer cleanup()
-
-	ctx := context.Background()
-	repos := database.NewRepositories(db)
-
-	defer func() {
-		if recover() == nil {
-			t.Error("expected the body's panic to reach the caller")
-		}
-	}()
-
-	_ = repos.WithTx(ctx, func(ctx context.Context, tx *sql.Tx) error {
-		_, err := tx.ExecContext(ctx, "ROLLBACK")
-		if err != nil {
-			return err
-		}
-
-		panic(errIntentionalRollback)
-	})
-}
-
 func TestRepositoriesReadTransaction(t *testing.T) {
 	t.Parallel()
 

internal/database/schema/001.sql

@@ -86,7 +86,6 @@ CREATE TABLE IF NOT EXISTS snapshots (
     completed_at INTEGER,
     file_count INTEGER NOT NULL DEFAULT 0,
     chunk_count INTEGER NOT NULL DEFAULT 0,
-    new_chunk_size INTEGER NOT NULL DEFAULT 0,
     blob_count INTEGER NOT NULL DEFAULT 0,
     total_size INTEGER NOT NULL DEFAULT 0,
     blob_size INTEGER NOT NULL DEFAULT 0,

internal/database/snapshots.go

@@ -129,7 +129,6 @@ func (r *SnapshotRepository) UpdateExtendedStats(
 	compressionLevel int,
 	uploadBytes int64,
 	uploadDurationMs int64,
-	newChunkSize int64,
 ) error {
 	compressionRatio, err := r.extendedCompressionRatio(
 		ctx, tx, snapshotID, blobUncompressedSize,
@@ -144,19 +143,18 @@ func (r *SnapshotRepository) UpdateExtendedStats(
 		    compression_ratio = ?,
 		    compression_level = ?,
 		    upload_bytes = ?,
-		    upload_duration_ms = ?,
-		    new_chunk_size = ?
+		    upload_duration_ms = ?
 		WHERE id = ?
 	`
 
 	if tx != nil {
 		_, err = tx.ExecContext(ctx, query,
 			blobUncompressedSize, compressionRatio, compressionLevel,
-			uploadBytes, uploadDurationMs, newChunkSize, snapshotID)
+			uploadBytes, uploadDurationMs, snapshotID)
 	} else {
 		_, err = r.db.ExecWithLog(ctx, query,
 			blobUncompressedSize, compressionRatio, compressionLevel,
-			uploadBytes, uploadDurationMs, newChunkSize, snapshotID)
+			uploadBytes, uploadDurationMs, snapshotID)
 	}
 
 	if err != nil {
@@ -596,24 +594,45 @@ func (r *SnapshotRepository) GetSnapshotUncompressedChunkSize(
 	return totalSize, nil
 }
 
-// GetSnapshotNewChunkSize returns the total plaintext size of the chunks the
-// snapshot's backup stored that were not stored before, as the backup
-// recorded it. It is not derived from the snapshot's files: a file's row is
-// shared by every snapshot that lists it and is rewritten when the file
-// changes, so it shows only the file's latest chunks.
+// GetSnapshotNewChunkSize returns the sum of plaintext sizes of chunks that are
+// referenced by this snapshot but not by any earlier completed snapshot known to
+// the local database. The result is the marginal uncompressed data this snapshot
+// added to the dedup pool — i.e., the delta from prior snapshots.
 func (r *SnapshotRepository) GetSnapshotNewChunkSize(
 	ctx context.Context, snapshotID string,
 ) (int64, error) {
-	query := `SELECT new_chunk_size FROM snapshots WHERE id = ?`
+	query := `
+		WITH this_snap_chunks AS (
+			SELECT DISTINCT fc.chunk_hash
+			FROM snapshot_files sf
+			JOIN file_chunks fc ON sf.file_id = fc.file_id
+			WHERE sf.snapshot_id = ?
+		),
+		prior_chunks AS (
+			SELECT DISTINCT fc.chunk_hash
+			FROM snapshots s
+			JOIN snapshot_files sf ON sf.snapshot_id = s.id
+			JOIN file_chunks fc ON fc.file_id = sf.file_id
+			WHERE s.completed_at IS NOT NULL
+			  AND s.id != ?
+			  AND s.started_at < (SELECT started_at FROM snapshots WHERE id = ?)
+		)
+		SELECT COALESCE(SUM(c.size), 0)
+		FROM chunks c
+		JOIN this_snap_chunks t ON c.chunk_hash = t.chunk_hash
+		WHERE c.chunk_hash NOT IN (SELECT chunk_hash FROM prior_chunks)
+	`
 
-	var newChunkSize int64
+	var totalSize int64
 
-	err := r.db.conn.QueryRowContext(ctx, query, snapshotID).Scan(&newChunkSize)
+	err := r.db.conn.QueryRowContext(
+		ctx, query, snapshotID, snapshotID, snapshotID,
+	).Scan(&totalSize)
 	if err != nil {
 		return 0, fmt.Errorf("querying new chunk size: %w", err)
 	}
 
-	return newChunkSize, nil
+	return totalSize, nil
 }
 
 // GetIncompleteSnapshots returns all snapshots that haven't been completed

internal/log/tty_handler.go

@@ -10,8 +10,6 @@ import (
 	"sync"
 	"time"
 	"unicode"
-
-	"github.com/dustin/go-humanize"
 )
 
 // groupSeparator joins an open group path to an attribute key. This
@@ -306,13 +304,18 @@ func formatDuration(d time.Duration) string {
 	}
 }
 
-// formatBytes formats a byte count with humanize.Bytes, as every command
-// prints one. humanize.Bytes takes no negative count, so one is printed
-// as it is.
+// formatBytes formats bytes in a human-readable way
 func formatBytes(b int64) string {
-	if b < 0 {
+	const unit = 1024
+	if b < unit {
 		return fmt.Sprintf("%d B", b)
 	}
 
-	return humanize.Bytes(uint64(b))
+	div, exp := int64(unit), 0
+	for n := b / unit; n >= unit; n /= unit {
+		div *= unit
+		exp++
+	}
+
+	return fmt.Sprintf("%.1f %cB", float64(b)/float64(div), "KMGTPE"[exp])
 }

internal/log/tty_handler_test.go

@@ -200,8 +200,7 @@ func TestTTYHandlerWithGroupQualifiesKeys(t *testing.T) {
 func TestTTYHandlerByteFormattingSurvivesGrouping(t *testing.T) {
 	t.Parallel()
 
-	// Printed as "1.0 MB", in powers of 1000 like every other byte count.
-	const oneMegabyte = 1_000_000
+	const oneAndAHalfKiB = 1536
 
 	for name, testCase := range map[string]struct {
 		derive func(*slog.Logger) *slog.Logger
@@ -224,13 +223,13 @@ func TestTTYHandlerByteFormattingSurvivesGrouping(t *testing.T) {
 			var buf bytes.Buffer
 
 			logger := slog.New(log.NewTTYHandler(&buf, debugHandlerOptions()))
-			testCase.derive(logger).Info("uploaded", "bytes", oneMegabyte)
+			testCase.derive(logger).Info("uploaded", "bytes", oneAndAHalfKiB)
 
 			line := ansiEscape.ReplaceAllString(buf.String(), "")
 
-			assert.Contains(t, line, testCase.key+"=1.0 MB",
+			assert.Contains(t, line, testCase.key+"=1.5 KB",
 				"a byte count must be human-readable however it is qualified")
-			assert.NotContains(t, line, strconv.Itoa(oneMegabyte),
+			assert.NotContains(t, line, strconv.Itoa(oneAndAHalfKiB),
 				"the raw number must not survive the formatting")
 		})
 	}

internal/snapshot/exclude_test.go

@@ -531,50 +531,3 @@ func TestExcludePatterns_UnanchoredPatternFile(t *testing.T) {
 	require.Equal(t, 1, result.FilesScanned,
 		"Unanchored pattern for file should match anywhere")
 }
-
-func TestExcludePatterns_DoubleStarDirectoryAtEveryDepth(t *testing.T) {
-	t.Parallel()
-
-	// As in gitignore, a leading **/ also matches directly under the source dir
-	fs := setupAnchoredTestFS(t)
-
-	scanner, repos, cleanup := createTestScanner(t, fs, []string{"**/projectname"})
-	defer cleanup()
-
-	ctx := context.Background()
-	createSnapshotRecord(ctx, t, repos, "test-snapshot")
-
-	result, err := scanner.Scan(ctx, "/backup", "test-snapshot")
-	require.NoError(t, err)
-
-	// **/projectname should exclude BOTH:
-	// - /backup/projectname/file.txt
-	// - /backup/otherproject/projectname/file.txt
-	// Total files: 4, excluded: 2
-	require.Equal(t, 2, result.FilesScanned,
-		"**/ directory pattern should match at the top level and nested")
-}
-
-func TestExcludePatterns_DoubleStarFileAtEveryDepth(t *testing.T) {
-	t.Parallel()
-
-	// As in gitignore, a leading **/ also matches directly under the source dir
-	fs := setupAnchoredTestFS(t)
-
-	scanner, repos, cleanup := createTestScanner(t, fs, []string{"**/*.txt"})
-	defer cleanup()
-
-	ctx := context.Background()
-	createSnapshotRecord(ctx, t, repos, "test-snapshot")
-
-	result, err := scanner.Scan(ctx, "/backup", "test-snapshot")
-	require.NoError(t, err)
-
-	// **/*.txt should exclude ALL .txt files:
-	// - /backup/file.txt
-	// - /backup/projectname/file.txt
-	// - /backup/otherproject/projectname/file.txt
-	// Total files: 4, excluded: 3
-	require.Equal(t, 1, result.FilesScanned,
-		"**/ file pattern should match at the top level and nested")
-}

internal/snapshot/module.go

@@ -16,6 +16,9 @@ type ScannerParams struct {
 	Fs             afero.Fs
 	Exclude        []string // Exclude patterns (combined global + snapshot-specific)
 	SkipErrors     bool     // Skip file read errors (log loudly but continue)
+	// PreviousSnapshotID is the most recent completed snapshot of the
+	// same name, "" for none.
+	PreviousSnapshotID string
 }
 
 // Module exports backup functionality as an fx module.
@@ -44,17 +47,18 @@ func provideScannerFactory(
 		}
 
 		return NewScanner(ScannerConfig{
-			FS:               params.Fs,
-			ChunkSize:        cfg.ChunkSize.Int64(),
-			Repositories:     repos,
-			Storage:          storer,
-			MaxBlobSize:      cfg.BlobSizeLimit.Int64(),
-			CompressionLevel: cfg.CompressionLevel,
-			AgeRecipients:    cfg.AgeRecipients,
-			EnableProgress:   params.EnableProgress,
-			UI:               params.UI,
-			Exclude:          excludes,
-			SkipErrors:       params.SkipErrors,
+			FS:                 params.Fs,
+			ChunkSize:          cfg.ChunkSize.Int64(),
+			Repositories:       repos,
+			Storage:            storer,
+			MaxBlobSize:        cfg.BlobSizeLimit.Int64(),
+			CompressionLevel:   cfg.CompressionLevel,
+			AgeRecipients:      cfg.AgeRecipients,
+			EnableProgress:     params.EnableProgress,
+			UI:                 params.UI,
+			Exclude:            excludes,
+			SkipErrors:         params.SkipErrors,
+			PreviousSnapshotID: params.PreviousSnapshotID,
 		})
 	}
 }

internal/snapshot/scanner.go

@@ -58,6 +58,10 @@ type Scanner struct {
 	compressionLevel int
 	ageRecipient     string
 	snapshotID       string // Current snapshot being processed
+	// previousSnapshotID is the most recent completed snapshot of the
+	// same name, "" for none. Only a file it lists can be counted as
+	// deleted.
+	previousSnapshotID string
 	// currentSourcePath is the source directory being scanned, stored with
 	// each file record.
 	currentSourcePath string
@@ -129,15 +133,16 @@ type ScannerConfig struct {
 	// SkipErrors skips files that cannot be opened or read (log loudly but
 	// continue); packer, database, encryption, and upload errors still abort.
 	SkipErrors bool
+	// PreviousSnapshotID is the most recent completed snapshot of the
+	// same name, "" for none.
+	PreviousSnapshotID string
 }
 
 // ScanResult contains the results of a scan operation. Files and bytes
 // are counted per file: BytesScanned is the size of the new and changed
 // files, BytesSkipped that of the unchanged ones. FilesFailed counts the
 // new and changed files that phase 2 could not store; FilesScanned
-// includes them and BytesScanned does not. ChunksCreated counts the
-// chunks that were not already stored, and NewChunkSize is their total
-// size.
+// includes them and BytesScanned does not.
 type ScanResult struct {
 	FilesScanned   int
 	FilesSkipped   int
@@ -147,7 +152,6 @@ type ScanResult struct {
 	BytesSkipped   int64
 	BytesDeleted   int64
 	ChunksCreated  int
-	NewChunkSize   int64
 	BlobsCreated   int
 	BlobsUploaded  int
 	BytesUploaded  int64
@@ -207,6 +211,7 @@ func NewScanner(cfg ScannerConfig) *Scanner {
 		compiledExclude:    compiledExclude,
 		progress:           progress,
 		skipErrors:         cfg.SkipErrors,
+		previousSnapshotID: cfg.PreviousSnapshotID,
 		ui:                 uiw,
 		pendingChunkHashes: make(map[string]struct{}),
 	}
@@ -258,8 +263,9 @@ func (s *Scanner) Scan(
 
 	filesToProcess := scanResult.FilesToProcess
 
-	// Phase 1b: Detect deleted files by comparing DB against scanned files
-	err = s.detectDeletedFilesFromMap(ctx, knownFiles, existingFiles, result)
+	// Phase 1b: Detect deleted files by comparing the previous snapshot
+	// of this name against scanned files
+	err = s.detectDeletedFiles(ctx, path, existingFiles, result)
 	if err != nil {
 		return nil, fmt.Errorf("detecting deleted files: %w", err)
 	}
@@ -439,9 +445,8 @@ func (s *Scanner) summarizeScanPhase(
 }
 
 // loadKnownFiles loads the known files at and beneath path from the
-// database into a map for fast lookup. Every loaded file the scan does
-// not find is counted as deleted. This avoids per-file database queries
-// during the scan phase.
+// database into a map for fast lookup. This avoids per-file database
+// queries during the scan phase.
 func (s *Scanner) loadKnownFiles(
 	ctx context.Context, path string,
 ) (map[string]*database.File, error) {
@@ -1869,12 +1874,11 @@ func (s *Scanner) processFileStreaming(
 	return nil
 }
 
-// updateChunkStats counts a chunk that was not already stored, and its
-// size. The scan result's file counts, BytesScanned and BytesSkipped are
-// not touched here: the scan phase counts each file once.
+// updateChunkStats counts a chunk that was not already stored. The scan
+// result's file counts, BytesScanned and BytesSkipped are not touched
+// here: the scan phase counts each file once.
 func (s *Scanner) updateChunkStats(chunkSize int64, result *ScanResult) {
 	result.ChunksCreated++
-	result.NewChunkSize += chunkSize
 
 	if s.progress != nil {
 		s.progress.GetStats().ChunksCreated.Add(1)
@@ -1942,21 +1946,28 @@ func (s *Scanner) queueFileForBatchInsert(
 	})
 }
 
-// detectDeletedFilesFromMap finds files that existed in previous snapshots
-// but no longer exist. Uses pre-loaded maps to avoid any filesystem or
-// database access.
-func (s *Scanner) detectDeletedFilesFromMap(
+// detectDeletedFiles counts as deleted each file at or beneath path that
+// the previous snapshot of this name lists and the walk did not find.
+// A file that is excluded, or inside an excluded directory, is not
+// counted: the walk skips it whether or not it is still on disk.
+func (s *Scanner) detectDeletedFiles(
 	ctx context.Context,
-	knownFiles map[string]*database.File,
+	path string,
 	existingFiles map[string]struct{},
 	result *ScanResult,
 ) error {
-	if len(knownFiles) == 0 {
+	if s.previousSnapshotID == "" {
 		return nil
 	}
 
-	// Check each known file against the enumerated set (no filesystem access needed)
-	for path, file := range knownFiles {
+	previousFiles, err := s.repos.Files.ListUnderPathInSnapshot(
+		ctx, path, s.previousSnapshotID)
+	if err != nil {
+		return fmt.Errorf("listing files of snapshot %s: %w",
+			s.previousSnapshotID, err)
+	}
+
+	for _, file := range previousFiles {
 		// Check context cancellation periodically
 		select {
 		case <-ctx.Done():
@@ -1964,13 +1975,16 @@ func (s *Scanner) detectDeletedFilesFromMap(
 		default:
 		}
 
-		// Check if the file exists in our enumerated set
-		if _, exists := existingFiles[path]; !exists {
-			// File has been deleted
-			result.FilesDeleted++
-			result.BytesDeleted += file.Size
-			log.Debug("Detected deleted file", "path", path, "size", file.Size)
+		filePath := file.Path.String()
+
+		_, exists := existingFiles[filePath]
+		if exists || s.excludedOrInExcludedDir(filePath, path) {
+			continue
 		}
+
+		result.FilesDeleted++
+		result.BytesDeleted += file.Size
+		log.Debug("Detected deleted file", "path", filePath, "size", file.Size)
 	}
 
 	if result.FilesDeleted > 0 {
@@ -1981,6 +1995,20 @@ func (s *Scanner) detectDeletedFilesFromMap(
 	return nil
 }
 
+// excludedOrInExcludedDir reports whether filePath, which is at or
+// beneath rootPath, or any directory between rootPath and it, matches an
+// exclude pattern. A pattern such as **/node_modules matches the
+// directory but not the files inside it, which the walk skips too.
+func (s *Scanner) excludedOrInExcludedDir(filePath, rootPath string) bool {
+	for p := filePath; len(p) > len(rootPath); p = filepath.Dir(p) {
+		if s.shouldExclude(p, rootPath) {
+			return true
+		}
+	}
+
+	return false
+}
+
 // wrapPermissionError augments permission errors with platform-specific
 // remediation instructions. On macOS, TCC-protected directories (Calendars,
 // Reminders, Photos, etc.) return EPERM unless the running application has
@@ -2022,14 +2050,6 @@ func compileExcludePatterns(patterns []string) []compiledPattern {
 		// Remove trailing slash if present (directory indicator)
 		pattern = strings.TrimSuffix(pattern, "/")
 
-		// A leading "**/" demands a "/" before the name and so misses an
-		// entry directly under the source path. An unanchored pattern
-		// already matches at every depth, so drop the prefix: as in
-		// gitignore, "**/x" then also matches a top-level "x".
-		if !anchored {
-			pattern = strings.TrimPrefix(pattern, "**/")
-		}
-
 		// Compile the glob pattern
 		// For patterns without path separators, we need to match them as components
 		// e.g., ".git" should match ".git" anywhere in the path

internal/snapshot/snapshot.go

@@ -199,7 +199,6 @@ func (sm *SnapshotManager) UpdateSnapshotStatsExtended(
 			stats.CompressionLevel,
 			stats.BytesUploaded,
 			stats.UploadDurationMs,
-			stats.NewChunkSize,
 		)
 	})
 }
@@ -907,7 +906,6 @@ type ExtendedBackupStats struct {
 	BlobUncompressedSize int64 // Total uncompressed size of all referenced blobs
 	CompressionLevel     int   // Compression level used for this snapshot
 	UploadDurationMs     int64 // Total milliseconds spent uploading to S3
-	NewChunkSize         int64 // Total size of the chunks counted in ChunksCreated
 }
 
 // deleteOtherSnapshots deletes all snapshots except the current one

internal/storage/url.go

@@ -17,10 +17,8 @@ const (
 
 // Sentinel errors for storage URL parsing.
 var (
-	ErrEmptyStorageURL  = errors.New("storage URL is empty")
-	ErrEmptyFilePath    = errors.New("file URL path is empty")
-	ErrRelativeFilePath = errors.New(
-		"file URL needs an absolute path, as in file:///path/to/backup")
+	ErrEmptyStorageURL   = errors.New("storage URL is empty")
+	ErrEmptyFilePath     = errors.New("file URL path is empty")
 	ErrMissingBucket     = errors.New("s3 URL missing bucket name")
 	ErrMissingRemote     = errors.New("rclone URL missing remote name")
 	ErrUnsupportedScheme = errors.New(
@@ -53,8 +51,17 @@ func ParseStorageURL(rawURL string) (*URL, error) {
 		return nil, ErrEmptyStorageURL
 	}
 
+	// Handle file:// URLs
 	if after, ok := strings.CutPrefix(rawURL, "file://"); ok {
-		return parseFileURL(after)
+		path := after
+		if path == "" {
+			return nil, ErrEmptyFilePath
+		}
+
+		return &URL{
+			Scheme: schemeFile,
+			Prefix: path,
+		}, nil
 	}
 
 	if strings.HasPrefix(rawURL, "s3://") {
@@ -68,27 +75,6 @@ func ParseStorageURL(rawURL string) (*URL, error) {
 	return nil, ErrUnsupportedScheme
 }
 
-// parseFileURL parses the path that follows file://. The path must be
-// absolute: a relative one would resolve against the working directory,
-// so the destination would move with it. Percent-escapes are decoded, so
-// my%20stick names the directory "my stick"; a literal space is kept.
-func parseFileURL(rawPath string) (*URL, error) {
-	if rawPath == "" {
-		return nil, ErrEmptyFilePath
-	}
-
-	if !strings.HasPrefix(rawPath, "/") {
-		return nil, ErrRelativeFilePath
-	}
-
-	path, err := url.PathUnescape(rawPath)
-	if err != nil {
-		return nil, fmt.Errorf("invalid file URL path: %w", err)
-	}
-
-	return &URL{Scheme: schemeFile, Prefix: path}, nil
-}
-
 // parseS3URL parses an s3://bucket/prefix URL. It rejects credentials in
 // the userinfo and any query parameter other than endpoint, region and
 // ssl, so a credential-bearing URL is never stored or echoed.

internal/storage/url_parse_test.go

@@ -14,10 +14,7 @@ import (
 func TestParseStorageURLValid(t *testing.T) {
 	t.Parallel()
 
-	const (
-		bucket     = "mybucket"
-		fileScheme = "file"
-	)
+	const bucket = "mybucket"
 
 	cases := []struct {
 		name string
@@ -27,17 +24,7 @@ func TestParseStorageURLValid(t *testing.T) {
 		{
 			name: "file absolute path",
 			raw:  "file:///var/backups/vaultik",
-			want: &storage.URL{Scheme: fileScheme, Prefix: "/var/backups/vaultik"},
-		},
-		{
-			name: "file percent-escaped path is decoded",
-			raw:  "file:///Volumes/my%20stick/backup",
-			want: &storage.URL{Scheme: fileScheme, Prefix: "/Volumes/my stick/backup"},
-		},
-		{
-			name: "file path with a literal space",
-			raw:  "file:///Volumes/my stick/backup",
-			want: &storage.URL{Scheme: fileScheme, Prefix: "/Volumes/my stick/backup"},
+			want: &storage.URL{Scheme: "file", Prefix: "/var/backups/vaultik"},
 		},
 		{
 			name: "s3 bucket and prefix, ssl defaults on",
@@ -103,7 +90,6 @@ func TestParseStorageURLErrors(t *testing.T) {
 	}{
 		{"empty url", "", storage.ErrEmptyStorageURL},
 		{"file empty path", "file://", storage.ErrEmptyFilePath},
-		{"file relative path", "file://dest", storage.ErrRelativeFilePath},
 		{"s3 missing bucket", "s3://", storage.ErrMissingBucket},
 		{"s3 missing bucket with path", "s3:///justprefix", storage.ErrMissingBucket},
 		{"rclone missing remote", "rclone://", storage.ErrMissingRemote},

internal/vaultik/blob_fetch.go

@@ -103,8 +103,6 @@ func (v *Vaultik) FetchAndDecryptBlob(
 }
 
 // FetchBlob downloads a blob and returns a reader for the encrypted data.
-// The reader is closed as soon as ctx is cancelled, which ends a read
-// blocked inside it.
 func (v *Vaultik) FetchBlob(
 	ctx context.Context, blobHash string,
 ) (io.ReadCloser, error) {
@@ -122,47 +120,5 @@ func (v *Vaultik) FetchBlob(
 		return nil, fmt.Errorf("downloading blob %s: %w", shortHash(blobHash), err)
 	}
 
-	return newCloseOnCancelReader(ctx, rc), nil
-}
-
-// closeOnCancelReader closes the reader it wraps when ctx is cancelled.
-// Not every backend's reader stops on cancel by itself (the file
-// backend's does not), and a read stalled on a slow or hung source would
-// otherwise outlast the shutdown timeout, so the process would exit
-// before restore or deep verify removed its decrypted temporary files.
-type closeOnCancelReader struct {
-	io.ReadCloser
-
-	ctx  context.Context //nolint:containedctx // Read reports its error
-	stop func() bool
-}
-
-func newCloseOnCancelReader(
-	ctx context.Context, rc io.ReadCloser,
-) *closeOnCancelReader {
-	return &closeOnCancelReader{
-		ReadCloser: rc,
-		ctx:        ctx,
-		stop:       context.AfterFunc(ctx, func() { _ = rc.Close() }),
-	}
-}
-
-// Read returns the context's error, not the closed reader's, once ctx
-// has been cancelled.
-func (r *closeOnCancelReader) Read(p []byte) (int, error) {
-	n, err := r.ReadCloser.Read(p)
-	if err != nil && r.ctx.Err() != nil {
-		return n, r.ctx.Err()
-	}
-
-	return n, err
-}
-
-// Close closes the wrapped reader, unless the cancel already closed it.
-func (r *closeOnCancelReader) Close() error {
-	if !r.stop() {
-		return nil
-	}
-
-	return r.ReadCloser.Close()
+	return rc, nil
 }

internal/vaultik/destination_validation_test.go

@@ -161,14 +161,13 @@ func TestVerifyManifestBlobsRejectsShortHash(t *testing.T) {
 		Blobs: []snapshot.BlobInfo{{Hash: "abc", CompressedSize: 1}},
 	}
 
-	verified, missing, mismatched, missingSize, unchecked, err :=
+	verified, missing, mismatched, missingSize, err :=
 		v.verifyManifestBlobs(manifest, &VerifyOptions{JSON: true})
 	require.ErrorIs(t, err, errInvalidBlobHash)
 	require.Zero(t, verified)
 	require.Zero(t, missing)
 	require.Zero(t, mismatched)
 	require.Zero(t, missingSize)
-	require.Empty(t, unchecked)
 }
 
 // TestVerifyBlobChunksRejectsNegativeLength proves a blob_chunks row with a

internal/vaultik/fault_injection_test.go

@@ -661,17 +661,18 @@ func faultScannerFactory(
 ) snapshot.ScannerFactory {
 	return func(params snapshot.ScannerParams) *snapshot.Scanner {
 		return snapshot.NewScanner(snapshot.ScannerConfig{
-			FS:               params.Fs,
-			Storage:          storer,
-			ChunkSize:        faultChunkSize,
-			MaxBlobSize:      faultMaxBlobSize,
-			CompressionLevel: cfg.CompressionLevel,
-			AgeRecipients:    cfg.AgeRecipients,
-			Repositories:     repos,
-			EnableProgress:   params.EnableProgress,
-			UI:               params.UI,
-			Exclude:          params.Exclude,
-			SkipErrors:       params.SkipErrors,
+			FS:                 params.Fs,
+			Storage:            storer,
+			ChunkSize:          faultChunkSize,
+			MaxBlobSize:        faultMaxBlobSize,
+			CompressionLevel:   cfg.CompressionLevel,
+			AgeRecipients:      cfg.AgeRecipients,
+			Repositories:       repos,
+			EnableProgress:     params.EnableProgress,
+			UI:                 params.UI,
+			Exclude:            params.Exclude,
+			SkipErrors:         params.SkipErrors,
+			PreviousSnapshotID: params.PreviousSnapshotID,
 		})
 	}
 }

internal/vaultik/helpers.go

@@ -89,6 +89,22 @@ type SnapshotInfo struct {
 	RemotePresent    *bool            `json:"remote_present"`
 }
 
+// formatBytes formats bytes in a human-readable format
+func formatBytes(bytes int64) string {
+	const unit = 1024
+	if bytes < unit {
+		return fmt.Sprintf("%d B", bytes)
+	}
+
+	div, exp := int64(unit), 0
+	for n := bytes / unit; n >= unit; n /= unit {
+		div *= unit
+		exp++
+	}
+
+	return fmt.Sprintf("%.1f %cB", float64(bytes)/float64(div), "KMGTPE"[exp])
+}
+
 // parseSnapshotTimestamp extracts the timestamp from a snapshot ID
 // Format: hostname_snapshotname_2026-01-12T14:41:15Z
 func parseSnapshotTimestamp(snapshotID string) (time.Time, error) {

internal/vaultik/new_chunk_size_test.go

@@ -1,133 +0,0 @@
-package vaultik_test
-
-import (
-	"bytes"
-	"context"
-	"maps"
-	"path/filepath"
-	"testing"
-
-	"github.com/spf13/afero"
-	"github.com/stretchr/testify/assert"
-	"github.com/stretchr/testify/require"
-	"sneak.berlin/go/vaultik/internal/chunker"
-	"sneak.berlin/go/vaultik/internal/database"
-	"sneak.berlin/go/vaultik/internal/log"
-	"sneak.berlin/go/vaultik/internal/storage"
-	"sneak.berlin/go/vaultik/internal/vaultik"
-)
-
-// TestNewChunkSizeOfChangedFileStaysFixed covers
-// https://git.eeqj.de/sneak/vaultik/issues/311. A backup whose only change
-// is a modified file lists the size of the chunks that change added as its
-// NEW CHUNK SIZE, and a later backup that changes the file again leaves
-// every earlier snapshot's figure as it was. The file's row in the local
-// index is shared by all three snapshots and rewritten by each backup.
-func TestNewChunkSizeOfChangedFileStaysFixed(t *testing.T) {
-	log.Initialize(log.Config{})
-	t.Parallel()
-
-	fs := afero.NewOsFs()
-	tempDir := t.TempDir()
-	dataDir := filepath.Join(tempDir, "src")
-	dbPath := filepath.Join(tempDir, "index.sqlite")
-	changedPath := filepath.Join(dataDir, "changed.bin")
-
-	ctx := context.Background()
-	files := writeFaultSourceTree(t, fs, dataDir)
-	cfg := changedFileConfig(dataDir, dbPath)
-
-	appendRandomBytes(t, fs, files, changedPath, appendedFileSize)
-
-	store, err := storage.NewFileStorer(filepath.Join(tempDir, "remote"))
-	require.NoError(t, err)
-
-	db, err := database.New(ctx, dbPath)
-	require.NoError(t, err)
-	t.Cleanup(func() { _ = db.Close() })
-
-	repos := database.NewRepositories(db)
-	v := newBackupVaultik(ctx, cfg, store, repos, db, fs)
-
-	require.NoError(t, backUp(v, "first"))
-
-	firstFiles := maps.Clone(files)
-	firstID := localSnapshotID(ctx, t, repos, "first")
-
-	appendRandomBytes(t, fs, files, changedPath, faultChunkSize)
-	require.NoError(t, backUp(v, "second"))
-
-	secondID := localSnapshotID(ctx, t, repos, "second")
-	secondAdded := sizeOfNewChunks(t, files, firstFiles)
-	require.Positive(t, secondAdded)
-	assert.Equal(t, secondAdded, listedNewChunkSizes(t, v)[secondID],
-		"the second snapshot must count the chunks the change added")
-
-	appendRandomBytes(t, fs, files, changedPath, faultChunkSize)
-	require.NoError(t, backUp(v, "third"))
-
-	sizes := listedNewChunkSizes(t, v)
-	assert.Equal(t, sizeOfNewChunks(t, firstFiles, nil), sizes[firstID],
-		"a later backup must not change the first snapshot's figure")
-	assert.Equal(t, secondAdded, sizes[secondID],
-		"a later backup must not change the second snapshot's figure")
-}
-
-// sizeOfNewChunks returns the total size of the distinct chunks of the
-// files in after that no file in before has, cut the way the backup cuts
-// them.
-func sizeOfNewChunks(t *testing.T, after, before map[string][]byte) int64 {
-	t.Helper()
-
-	known := make(map[string]bool)
-	for _, chunk := range chunksOf(t, before) {
-		known[chunk.Hash] = true
-	}
-
-	var total int64
-
-	for _, chunk := range chunksOf(t, after) {
-		if !known[chunk.Hash] {
-			known[chunk.Hash] = true
-			total += chunk.Size
-		}
-	}
-
-	return total
-}
-
-// chunksOf returns the chunks of every file in files.
-func chunksOf(t *testing.T, files map[string][]byte) []chunker.Chunk {
-	t.Helper()
-
-	c := chunker.NewChunker(faultChunkSize)
-
-	var all []chunker.Chunk
-
-	for _, content := range files {
-		chunks, err := c.ChunkReader(bytes.NewReader(content))
-		require.NoError(t, err)
-
-		all = append(all, chunks...)
-	}
-
-	return all
-}
-
-// listedNewChunkSizes runs `snapshot list --json` and returns each listed
-// snapshot's new_chunk_size by snapshot ID.
-func listedNewChunkSizes(t *testing.T, v *vaultik.Vaultik) map[string]int64 {
-	t.Helper()
-
-	var out bytes.Buffer
-
-	v.Stdout = &out
-	require.NoError(t, v.ListSnapshots(true))
-
-	sizes := make(map[string]int64)
-	for _, row := range decodeListJSON(t, out.String()) {
-		sizes[row.ID] = row.NewChunkSize
-	}
-
-	return sizes
-}

internal/vaultik/restore_interrupt_test.go

@@ -142,14 +142,14 @@ func TestRestoreCleansTempDirOnInterrupt(t *testing.T) {
 }
 
 // scratchEntries returns the vaultik blob-cache and snapshot-database
-// scratch entries (restore's and deep verify's) currently present in dir.
+// scratch entries currently present in dir.
 func scratchEntries(t *testing.T, dir string) []string {
 	t.Helper()
 
 	var matches []string
 
 	for _, pattern := range []string{
-		"vaultik-blobcache-*", "vaultik-restore-*", "vaultik-verify-*",
+		"vaultik-blobcache-*", "vaultik-restore-*",
 	} {
 		found, err := filepath.Glob(filepath.Join(dir, pattern))
 		require.NoError(t, err)
@@ -206,119 +206,3 @@ func TestRestoreSkipErrorsCancelDuringBlobDownload(t *testing.T) {
 	assert.NotContains(t, out.String(), srcPath,
 		"the cancel was reported as a failed file")
 }
-
-// stallingBlobStorer wraps a Storer so that every blob download hands
-// over the first half of the blob and then stalls, ignoring the context,
-// as a file:// blob on a hung USB stick or network share does. Only
-// closing the returned reader ends the stall.
-type stallingBlobStorer struct {
-	storage.Storer
-
-	once    sync.Once
-	stalled chan struct{}
-}
-
-func newStallingBlobStorer(inner storage.Storer) *stallingBlobStorer {
-	return &stallingBlobStorer{Storer: inner, stalled: make(chan struct{})}
-}
-
-func (s *stallingBlobStorer) Get(
-	ctx context.Context, key string,
-) (io.ReadCloser, error) {
-	rc, err := s.Storer.Get(ctx, key)
-	if err != nil || !strings.HasPrefix(key, "blobs/") {
-		return rc, err
-	}
-
-	blob, err := io.ReadAll(rc)
-	_ = rc.Close()
-
-	if err != nil {
-		return nil, err
-	}
-
-	// The writer is never closed, so once the first half has been read
-	// the next Read blocks until the reader is closed.
-	pr, pw := io.Pipe()
-
-	go func() {
-		_, _ = pw.Write(blob[:len(blob)/2])
-
-		s.once.Do(func() { close(s.stalled) })
-	}()
-
-	return pr, nil
-}
-
-// TestInterruptDuringStalledBlobReadCleansTempDir stops a restore and a
-// deep verify while a blob read is stalled on a source that ignores the
-// context. Stopping must end that read, so the operation unwinds and
-// removes its decrypted scratch files well within the shutdown timeout
-// (issue #325).
-//
-// Not parallel: it points TMPDIR at a private directory (via t.Setenv)
-// so it can assert on exactly the scratch files the operation created.
-func TestInterruptDuringStalledBlobReadCleansTempDir(t *testing.T) {
-	log.Initialize(log.Config{})
-
-	operations := map[string]func(v *Vaultik, snapshotID, targetDir string) error{
-		"restore": func(v *Vaultik, snapshotID, targetDir string) error {
-			return v.Restore(&RestoreOptions{
-				SnapshotID: snapshotID,
-				TargetDir:  targetDir,
-			})
-		},
-		"deep verify": func(v *Vaultik, snapshotID, _ string) error {
-			return v.RunDeepVerify(snapshotID, &VerifyOptions{Deep: true})
-		},
-	}
-
-	for name, op := range operations {
-		t.Run(name, func(t *testing.T) {
-			fs := afero.NewOsFs()
-			root := t.TempDir()
-
-			// Random content, so the blob stays large enough to stall
-			// part-way through its compressed, encrypted body.
-			cfg, storer, snapshotID, _ := backupOneFile(context.Background(),
-				t, fs, root, "a.bin", randomBytes(t, 256*1024), 0o644)
-
-			scratch := filepath.Join(root, "scratch")
-			require.NoError(t, fs.MkdirAll(scratch, 0o755))
-			t.Setenv("TMPDIR", scratch)
-
-			stalling := newStallingBlobStorer(storer)
-
-			ctx, cancel := context.WithCancel(context.Background())
-			defer cancel()
-
-			v := newRestoreVaultik(ctx, cfg, stalling, fs)
-			v.cancel = cancel
-
-			var opErr error
-
-			stop := v.StartOperation(func() {
-				opErr = op(v, snapshotID, filepath.Join(root, "restored"))
-			})
-
-			select {
-			case <-stalling.stalled:
-			case <-time.After(30 * time.Second):
-				t.Fatal("the operation never reached a blob read")
-			}
-
-			require.NotEmpty(t, scratchEntries(t, scratch),
-				"expected decrypted scratch files to exist mid-read")
-
-			stopCtx, stopCancel := context.WithTimeout(
-				context.Background(), 10*time.Second)
-			defer stopCancel()
-
-			require.True(t, stop(stopCtx),
-				"stop timed out; the stalled blob read was not interrupted")
-			require.ErrorIs(t, opErr, context.Canceled)
-			require.Empty(t, scratchEntries(t, scratch),
-				"decrypted scratch files remained after the interrupt")
-		})
-	}
-}

internal/vaultik/shallow_verify_test.go

@@ -4,20 +4,15 @@ import (
 	"bytes"
 	"context"
 	"encoding/json"
-	"errors"
-	"fmt"
 	"io"
 	"os"
-	"path"
 	"path/filepath"
-	"slices"
 	"testing"
 
 	"github.com/spf13/afero"
 	"github.com/stretchr/testify/require"
 	"sneak.berlin/go/vaultik/internal/log"
 	"sneak.berlin/go/vaultik/internal/snapshot"
-	"sneak.berlin/go/vaultik/internal/storage"
 	"sneak.berlin/go/vaultik/internal/ui"
 	"sneak.berlin/go/vaultik/internal/vaultik"
 )
@@ -156,224 +151,6 @@ func TestShallowVerifyDetectsMissingDatabase(t *testing.T) {
 		"shallow verify must fail when db.zst.age is absent")
 }
 
-// errStatDenied stands in for any storage error other than not-found: a
-// permission error, an S3 403, a dropped connection.
-var errStatDenied = errors.New("injected stat failure")
-
-// statFailingStorer fails Stat with errStatDenied for the keys in
-// failKeys and passes every other call to the wrapped Storer.
-type statFailingStorer struct {
-	storage.Storer
-
-	failKeys []string
-}
-
-func (s statFailingStorer) Stat(
-	ctx context.Context, key string,
-) (*storage.ObjectInfo, error) {
-	if slices.Contains(s.failKeys, key) {
-		return nil, fmt.Errorf("stat %q: %w", key, errStatDenied)
-	}
-
-	return s.Storer.Stat(ctx, key)
-}
-
-// TestShallowVerifyReportsStatErrorsApartFromMissing backs up a real
-// snapshot, deletes one blob, and makes storage fail Stat with an error
-// other than not-found for a second blob and for the encrypted database.
-// Only the deleted blob may be counted as missing. The second blob and
-// the database must be reported as could not be checked, with the error
-// storage returned, and verify must fail, in the text output and under
-// --json.
-func TestShallowVerifyReportsStatErrorsApartFromMissing(t *testing.T) {
-	log.Initialize(log.Config{})
-	t.Parallel()
-
-	fs := afero.NewOsFs()
-	tempDir := t.TempDir()
-
-	dataDir := filepath.Join(tempDir, "source")
-	storeDir := filepath.Join(tempDir, "remote")
-	dbPath := filepath.Join(tempDir, "index.sqlite")
-
-	chunkSize := int64(32 * 1024)
-	maxBlobSize := int64(128 * 1024)
-
-	// Random content, so the snapshot spans several blobs.
-	require.NoError(t, fs.MkdirAll(dataDir, 0o755))
-	appendRandomBytes(t, fs, map[string][]byte{},
-		filepath.Join(dataDir, "data.bin"), maxBlobSize*4)
-
-	ctx := context.Background()
-
-	cfg, storer, snapshotID := runFileStorageBackup(
-		ctx, t, fs, dataDir, storeDir, dbPath, chunkSize, maxBlobSize)
-
-	blobKeys := storedBlobKeys(t, storeDir)
-	require.GreaterOrEqual(t, len(blobKeys), 2, "expected at least two blobs")
-
-	missingKey, uncheckedKey := blobKeys[0], blobKeys[1]
-	missingHash, uncheckedHash := path.Base(missingKey), path.Base(uncheckedKey)
-
-	require.NoError(t, os.Remove(filepath.Join(storeDir, missingKey)))
-
-	dbKey := "metadata/" + snapshot.RemoteSnapshotKey(snapshotID) + "/db.zst.age"
-	failing := statFailingStorer{
-		Storer:   storer,
-		failKeys: []string{uncheckedKey, dbKey},
-	}
-
-	newVerifier := func(out io.Writer) *vaultik.Vaultik {
-		v := &vaultik.Vaultik{
-			Config:  cfg,
-			Storage: failing,
-			Fs:      fs,
-			Stdout:  out,
-			Stderr:  io.Discard,
-			UI:      ui.NewWithColor(io.Discard, false),
-		}
-		v.SetContext(ctx)
-
-		return v
-	}
-
-	var out bytes.Buffer
-
-	err := newVerifier(&out).VerifySnapshotWithOptions(
-		snapshotID, &vaultik.VerifyOptions{JSON: true})
-	require.Error(t, err)
-
-	result := decodeVerifyResult(t, out.Bytes())
-	require.Equal(t, "failed", result.Status)
-	require.Equal(t, 1, result.Missing, "only the deleted blob is missing")
-	require.Equal(t, result.BlobCount-2, result.Verified)
-	require.Len(t, result.Unchecked, 1)
-	require.Equal(t, uncheckedHash, result.Unchecked[0].Hash)
-	require.Contains(t, result.Unchecked[0].Error, errStatDenied.Error())
-	require.False(t, result.DatabaseMissing,
-		"a database that could not be checked is not missing")
-	require.Contains(t, result.DatabaseCheckError, errStatDenied.Error())
-
-	out.Reset()
-	err = newVerifier(&out).VerifySnapshotWithOptions(
-		snapshotID, &vaultik.VerifyOptions{})
-	require.Error(t, err)
-
-	text := out.String()
-	require.Contains(t, text, "Missing: "+missingHash)
-	require.NotContains(t, text, "Missing: "+uncheckedHash)
-	require.Contains(t, text, "Could not check: "+uncheckedHash)
-	require.Contains(t, text, "Encrypted database:       could not be checked")
-	require.Contains(t, text, errStatDenied.Error())
-	require.Contains(t, text, "FAILED")
-}
-
-// TestShallowVerifyQuietFailsOnStatErrorAlone backs up a healthy snapshot,
-// then makes storage fail Stat, with an error other than not-found, for
-// one blob alone and then for the encrypted database alone. Each run must
-// fail verify, and under --quiet, which drops the report, the error
-// storage returned must still reach stderr.
-//
-//nolint:paralleltest // captureProcessStderr replaces os.Stderr
-func TestShallowVerifyQuietFailsOnStatErrorAlone(t *testing.T) {
-	log.Initialize(log.Config{})
-
-	fs := afero.NewOsFs()
-	tempDir := t.TempDir()
-
-	dataDir := filepath.Join(tempDir, "source")
-	storeDir := filepath.Join(tempDir, "remote")
-	dbPath := filepath.Join(tempDir, "index.sqlite")
-
-	chunkSize := int64(32 * 1024)
-	maxBlobSize := int64(128 * 1024)
-
-	require.NoError(t, fs.MkdirAll(dataDir, 0o755))
-	require.NoError(t, afero.WriteFile(fs,
-		filepath.Join(dataDir, "data.bin"),
-		bytesPattern("shallow-quiet-", int(maxBlobSize*2)), 0o644))
-
-	ctx := context.Background()
-
-	cfg, storer, snapshotID := runFileStorageBackup(
-		ctx, t, fs, dataDir, storeDir, dbPath, chunkSize, maxBlobSize)
-
-	newQuietVerifier := func(s storage.Storer) *vaultik.Vaultik {
-		v := &vaultik.Vaultik{
-			Config:  cfg,
-			Storage: s,
-			Fs:      fs,
-			Stdout:  io.Discard,
-			Stderr:  io.Discard,
-			UI:      ui.NewWithColor(io.Discard, false),
-		}
-		v.SetContext(ctx)
-		v.UI.SetQuiet(true)
-
-		return v
-	}
-
-	require.NoError(t,
-		newQuietVerifier(storer).VerifySnapshotWithOptions(
-			snapshotID, &vaultik.VerifyOptions{}),
-		"shallow verify should pass on a healthy snapshot")
-
-	blobKeys := storedBlobKeys(t, storeDir)
-	require.NotEmpty(t, blobKeys)
-
-	dbKey := "metadata/" + snapshot.RemoteSnapshotKey(snapshotID) + "/db.zst.age"
-
-	for _, failKey := range []string{blobKeys[0], dbKey} {
-		v := newQuietVerifier(statFailingStorer{
-			Storer:   storer,
-			failKeys: []string{failKey},
-		})
-
-		var err error
-
-		stderr := captureProcessStderr(t, func() {
-			err = v.VerifySnapshotWithOptions(
-				snapshotID, &vaultik.VerifyOptions{})
-		})
-
-		require.Error(t, err,
-			"verify must fail when %s could not be checked", failKey)
-		require.Contains(t, stderr, errStatDenied.Error(),
-			"under --quiet the error for %s must still reach stderr", failKey)
-	}
-}
-
-// storedBlobKeys returns the storage key of every blob file under
-// storeDir, sorted.
-func storedBlobKeys(t *testing.T, storeDir string) []string {
-	t.Helper()
-
-	var keys []string
-
-	err := filepath.Walk(filepath.Join(storeDir, "blobs"),
-		func(p string, info os.FileInfo, err error) error {
-			if err != nil {
-				return err
-			}
-
-			if info.IsDir() {
-				return nil
-			}
-
-			rel, err := filepath.Rel(storeDir, p)
-			if err != nil {
-				return err
-			}
-
-			keys = append(keys, filepath.ToSlash(rel))
-
-			return nil
-		})
-	require.NoError(t, err)
-
-	return keys
-}
-
 // growOneBlob appends bytes to the first blob file found under blobsDir,
 // changing its on-disk size so it no longer matches the manifest.
 func growOneBlob(t *testing.T, fs afero.Fs, blobsDir string) {

internal/vaultik/snapshot.go

@@ -14,7 +14,6 @@ import (
 
 	"sneak.berlin/go/vaultik/internal/log"
 	"sneak.berlin/go/vaultik/internal/snapshot"
-	"sneak.berlin/go/vaultik/internal/storage"
 	"sneak.berlin/go/vaultik/internal/types"
 )
 
@@ -210,7 +209,6 @@ type snapshotStats struct {
 	totalFiles         int
 	totalBytes         int64
 	totalChunks        int
-	newChunkSize       int64
 	totalBlobs         int
 	totalBytesSkipped  int64
 	totalFilesSkipped  int
@@ -242,12 +240,18 @@ func (v *Vaultik) createNamedSnapshot(
 		return err
 	}
 
+	previousSnapshotID, err := v.previousSnapshotID(snapName)
+	if err != nil {
+		return err
+	}
+
 	scanner := v.ScannerFactory(snapshot.ScannerParams{
-		EnableProgress: !opts.Cron,
-		UI:             v.UI,
-		Fs:             v.Fs,
-		Exclude:        v.Config.GetExcludes(snapName),
-		SkipErrors:     opts.SkipErrors,
+		EnableProgress:     !opts.Cron,
+		UI:                 v.UI,
+		Fs:                 v.Fs,
+		Exclude:            v.Config.GetExcludes(snapName),
+		SkipErrors:         opts.SkipErrors,
+		PreviousSnapshotID: previousSnapshotID,
 	})
 
 	snapshotID, err := v.SnapshotManager.CreateSnapshotWithName(
@@ -282,6 +286,24 @@ func (v *Vaultik) createNamedSnapshot(
 	return nil
 }
 
+// previousSnapshotID returns the ID of the most recent completed snapshot
+// named snapName in the local index, or "" when there is none.
+func (v *Vaultik) previousSnapshotID(snapName string) (string, error) {
+	snapshots, err := v.Repositories.Snapshots.ListRecent(v.ctx, listRecentLimit)
+	if err != nil {
+		return "", fmt.Errorf("listing snapshots: %w", err)
+	}
+
+	for _, s := range snapshots {
+		if s.CompletedAt != nil &&
+			parseSnapshotName(s.ID.String(), s.Hostname.String()) == snapName {
+			return s.ID.String(), nil
+		}
+	}
+
+	return "", nil
+}
+
 // resolveSnapshotPaths resolves source directories to absolute paths
 // with symlink resolution.
 func (v *Vaultik) resolveSnapshotPaths(snapName string) ([]string, error) {
@@ -343,7 +365,6 @@ func (v *Vaultik) scanAllDirectories(
 		stats.totalFiles += result.FilesScanned
 		stats.totalBytes += result.BytesScanned
 		stats.totalChunks += result.ChunksCreated
-		stats.newChunkSize += result.NewChunkSize
 		stats.totalBlobs += result.BlobsCreated
 		stats.totalFilesSkipped += result.FilesSkipped
 		stats.totalFilesFailed += result.FilesFailed
@@ -406,7 +427,6 @@ func (v *Vaultik) finalizeSnapshotMetadata(
 		BlobUncompressedSize: stats.blobUncompressedSize,
 		CompressionLevel:     v.Config.CompressionLevel,
 		UploadDurationMs:     stats.uploadDuration.Milliseconds(),
-		NewChunkSize:         stats.newChunkSize,
 	}
 
 	err = v.SnapshotManager.UpdateSnapshotStatsExtended(v.ctx, snapshotID, extStats)
@@ -637,7 +657,7 @@ func (v *Vaultik) confirmAndExecutePurge(
 			v.stdoutf("  %s (%s, %s)\n",
 				snap.ID,
 				snap.Timestamp.Format("2006-01-02 15:04:05"),
-				ubytes(snap.CompressedSize))
+				formatBytes(snap.CompressedSize))
 		}
 	}
 
@@ -778,10 +798,18 @@ func (v *Vaultik) VerifySnapshotWithOptions(
 		v.stdoutf("Checking blob presence and sizes...\n")
 	}
 
-	v.checkSnapshotDatabase(remoteKey, result)
+	// A snapshot is only restorable if its encrypted database is present
+	// alongside the blobs. Shallow verify checks that the object exists; it
+	// does not decrypt it (that is deep verify's job).
+	dbPath := fmt.Sprintf("metadata/%s/db.zst.age", remoteKey)
 
-	result.Verified, result.Missing, result.Mismatched, result.MissingSize,
-		result.Unchecked, err = v.verifyManifestBlobs(manifest, opts)
+	_, dbErr := v.Storage.Stat(v.ctx, dbPath)
+	if dbErr != nil {
+		result.DatabaseMissing = true
+	}
+
+	result.Verified, result.Missing, result.Mismatched, result.MissingSize, err =
+		v.verifyManifestBlobs(manifest, opts)
 	if err != nil {
 		if opts.JSON {
 			result.Status = verifyStatusFailed
@@ -818,46 +846,25 @@ func (v *Vaultik) printVerifyHeader(snapshotID string, opts *VerifyOptions) {
 	}
 }
 
-// checkSnapshotDatabase records in result whether the snapshot's
-// encrypted database is missing or could not be checked. A snapshot is
-// only restorable if its database is present alongside the blobs.
-// Shallow verify checks that the object exists; it does not decrypt it
-// (that is deep verify's job).
-func (v *Vaultik) checkSnapshotDatabase(remoteKey string, result *VerifyResult) {
-	dbPath := fmt.Sprintf("metadata/%s/db.zst.age", remoteKey)
-
-	_, err := v.Storage.Stat(v.ctx, dbPath)
-
-	switch {
-	case errors.Is(err, storage.ErrNotFound):
-		result.DatabaseMissing = true
-	case err != nil:
-		result.DatabaseCheckError = err.Error()
-	}
-}
-
 // verifyManifestBlobs checks that each blob in the manifest is present in
 // storage with the size the manifest records, returning the counts of
 // blobs that were present with the right size, absent, and present but the
-// wrong size, the total bytes of the absent blobs, and the blobs it could
-// not check because storage returned an error other than not-found. It
-// does not read blob contents; deep verification (RunDeepVerify) does
-// that. The size comparison matches the deep path (see
-// verifyBlobExistenceFromDB).
+// wrong size, plus the total bytes of the absent blobs. It does not read
+// blob contents; deep verification (RunDeepVerify) does that. The size
+// comparison matches the deep path (see verifyBlobExistenceFromDB).
 func (v *Vaultik) verifyManifestBlobs(
 	manifest *snapshot.Manifest, opts *VerifyOptions,
-) (int, int, int, int64, []UncheckedBlob, error) {
+) (int, int, int, int64, error) {
 	var (
 		verified, missing, mismatched int
 		missingSize                   int64
-		unchecked                     []UncheckedBlob
 	)
 
 	for _, blob := range manifest.Blobs {
 		// The manifest is unauthenticated, so its blob hashes are checked
 		// before being spliced into a storage path.
 		if !isBlobHash(blob.Hash) {
-			return 0, 0, 0, 0, nil, fmt.Errorf("%w: %s",
+			return 0, 0, 0, 0, fmt.Errorf("%w: %s",
 				errInvalidBlobHash, shortHash(blob.Hash))
 		}
 
@@ -866,7 +873,7 @@ func (v *Vaultik) verifyManifestBlobs(
 
 		stat, err := v.Storage.Stat(v.ctx, blobPath)
 		switch {
-		case errors.Is(err, storage.ErrNotFound):
+		case err != nil:
 			if !opts.JSON && !v.UI.Quiet() {
 				v.stdoutf("  Missing: %s (%s)\n",
 					blob.Hash, ubytes(blob.CompressedSize))
@@ -874,13 +881,6 @@ func (v *Vaultik) verifyManifestBlobs(
 
 			missing++
 			missingSize += blob.CompressedSize
-		case err != nil:
-			if !opts.JSON && !v.UI.Quiet() {
-				v.stdoutf("  Could not check: %s (%v)\n", blob.Hash, err)
-			}
-
-			unchecked = append(unchecked,
-				UncheckedBlob{Hash: blob.Hash, Error: err.Error()})
 		case stat.Size != blob.CompressedSize:
 			if !opts.JSON && !v.UI.Quiet() {
 				v.stdoutf("  Wrong size: %s (store has %s, manifest lists %s)\n",
@@ -893,7 +893,7 @@ func (v *Vaultik) verifyManifestBlobs(
 		}
 	}
 
-	return verified, missing, mismatched, missingSize, unchecked, nil
+	return verified, missing, mismatched, missingSize, nil
 }
 
 // formatVerifyResult outputs the final verification results as JSON or
@@ -914,19 +914,9 @@ func (v *Vaultik) formatVerifyResult(
 		return v.outputVerifyJSON(result)
 	}
 
-	// --quiet drops the report but not the errors storage returned, which
-	// are logged on stderr. A failure is still returned either way, and
-	// the cli layer prints it on stderr.
-	if v.UI.Quiet() {
-		for _, blob := range result.Unchecked {
-			log.Warn("Could not check blob", "blob", blob.Hash, "error", blob.Error)
-		}
-
-		if result.DatabaseCheckError != "" {
-			log.Warn("Could not check the encrypted database",
-				"snapshot", result.SnapshotID, "error", result.DatabaseCheckError)
-		}
-	} else {
+	// Under --quiet a failure is still returned, and the cli layer
+	// prints it on stderr.
+	if !v.UI.Quiet() {
 		v.printVerifySummary(result, failure)
 	}
 
@@ -952,19 +942,10 @@ func (v *Vaultik) printVerifySummary(result *VerifyResult, failure string) {
 		v.stdoutf("  Wrong size:               %d blobs\n", result.Mismatched)
 	}
 
-	if len(result.Unchecked) > 0 {
-		v.stdoutf("  Could not check:          %d blobs\n", len(result.Unchecked))
-	}
-
 	if result.DatabaseMissing {
 		v.stdoutf("  Encrypted database:       missing\n")
 	}
 
-	if result.DatabaseCheckError != "" {
-		v.stdoutf("  Encrypted database:       could not be checked (%s)\n",
-			result.DatabaseCheckError)
-	}
-
 	v.stdoutf("  Status:       ")
 
 	if failure != "" {
@@ -992,19 +973,10 @@ func shallowVerifyFailure(result *VerifyResult) string {
 			fmt.Sprintf("%d blobs have the wrong size", result.Mismatched))
 	}
 
-	if len(result.Unchecked) > 0 {
-		parts = append(parts, fmt.Sprintf("%d blobs could not be checked",
-			len(result.Unchecked)))
-	}
-
 	if result.DatabaseMissing {
 		parts = append(parts, "the encrypted database is missing")
 	}
 
-	if result.DatabaseCheckError != "" {
-		parts = append(parts, "the encrypted database could not be checked")
-	}
-
 	return strings.Join(parts, "; ")
 }
 

internal/vaultik/snapshot_deleted_count_test.go

@@ -0,0 +1,196 @@
+package vaultik_test
+
+import (
+	"bytes"
+	"context"
+	"fmt"
+	"os"
+	"path/filepath"
+	"testing"
+	"time"
+
+	"github.com/spf13/afero"
+	"github.com/stretchr/testify/assert"
+	"github.com/stretchr/testify/require"
+	"sneak.berlin/go/vaultik/internal/config"
+	"sneak.berlin/go/vaultik/internal/database"
+	"sneak.berlin/go/vaultik/internal/log"
+	"sneak.berlin/go/vaultik/internal/storage"
+	"sneak.berlin/go/vaultik/internal/ui"
+	"sneak.berlin/go/vaultik/internal/vaultik"
+)
+
+// These tests cover https://git.eeqj.de/sneak/vaultik/issues/304: a
+// backup counts a file as deleted only when the previous snapshot of
+// the same name had it and it is gone, and never counts an excluded
+// file.
+
+// deletedCountEnv is a backup setup over the source directory src whose
+// user-facing output is kept in out. Each test configures its snapshots
+// with setSnapshot.
+type deletedCountEnv struct {
+	v   *vaultik.Vaultik
+	out *bytes.Buffer
+	src string
+}
+
+// newDeletedCountEnv writes files, keyed by path relative to src.
+func newDeletedCountEnv(t *testing.T, files map[string][]byte) *deletedCountEnv {
+	t.Helper()
+
+	ctx := context.Background()
+	fs := afero.NewOsFs()
+	tempDir := t.TempDir()
+	srcDir := filepath.Join(tempDir, "src")
+
+	for rel, content := range files {
+		path := filepath.Join(srcDir, rel)
+		require.NoError(t, fs.MkdirAll(filepath.Dir(path), 0o755))
+		require.NoError(t, afero.WriteFile(fs, path, content, 0o644))
+	}
+
+	cfg := faultTestConfig()
+	cfg.IndexPath = filepath.Join(tempDir, "index.sqlite")
+	cfg.Snapshots = map[string]config.SnapshotConfig{}
+
+	store, err := storage.NewFileStorer(filepath.Join(tempDir, "remote"))
+	require.NoError(t, err)
+
+	db, err := database.New(ctx, cfg.IndexPath)
+	require.NoError(t, err)
+	t.Cleanup(func() { _ = db.Close() })
+
+	repos := database.NewRepositories(db)
+	out := &bytes.Buffer{}
+	v := newBackupVaultik(ctx, cfg, store, repos, db, fs)
+	v.UI = ui.NewWithColor(out, false)
+
+	return &deletedCountEnv{v: v, out: out, src: srcDir}
+}
+
+// setSnapshot configures the snapshot name to back up the path rel
+// beneath src, with the given excludes.
+func (e *deletedCountEnv) setSnapshot(name, rel string, exclude ...string) {
+	e.v.Config.Snapshots[name] = config.SnapshotConfig{
+		Paths:   []string{filepath.Join(e.src, rel)},
+		Exclude: exclude,
+	}
+}
+
+// backUp runs a backup of the named snapshot and returns its output.
+func (e *deletedCountEnv) backUp(t *testing.T, name string) string {
+	t.Helper()
+
+	e.out.Reset()
+	require.NoError(t, e.v.CreateSnapshot(&vaultik.SnapshotCreateOptions{
+		Snapshots: []string{name},
+	}))
+
+	return e.out.String()
+}
+
+// A file this snapshot excludes is not counted as deleted: neither one
+// that another snapshot backs up, nor one that the previous snapshot of
+// this name had before the exclude was added.
+func TestBackupDoesNotCountExcludedFileAsDeleted(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	env := newDeletedCountEnv(t, map[string][]byte{
+		"top.txt":       []byte("top"),
+		"cache/tmp.bin": []byte("cache"),
+		"photos/a.jpg":  []byte("photo a"),
+		"photos/b.jpg":  []byte("photo b"),
+		"photos/c.jpg":  []byte("photo c"),
+	})
+	env.setSnapshot("photos", "photos")
+	env.setSnapshot("home", "", "/photos")
+
+	env.backUp(t, "photos")
+	assert.Contains(t, env.backUp(t, "home"), filesLine(2, 2, 0))
+
+	env.setSnapshot("home", "", "/photos", "/cache")
+	assert.Contains(t, env.backUp(t, "home"), filesLine(1, 0, 1))
+}
+
+// A file inside a directory that an exclude added after a backup
+// matches is not counted as deleted, though the pattern matches only the
+// directory.
+func TestBackupDoesNotCountFileInExcludedDirectoryAsDeleted(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	env := newDeletedCountEnv(t, map[string][]byte{
+		"top.txt":                 []byte("top"),
+		"app/node_modules/dep.js": []byte("dep"),
+	})
+	env.setSnapshot("home", "")
+
+	assert.Contains(t, env.backUp(t, "home"), filesLine(2, 2, 0))
+
+	env.setSnapshot("home", "", "**/node_modules")
+	assert.Contains(t, env.backUp(t, "home"), filesLine(1, 0, 1))
+}
+
+// A backup counts only files that the previous snapshot of its own name
+// had, not one that a later snapshot of another name over the same path
+// had and that is since removed.
+func TestBackupIgnoresSnapshotOfAnotherName(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	env := newDeletedCountEnv(t, map[string][]byte{
+		"kept.txt": []byte("kept"),
+	})
+	env.setSnapshot("home", "")
+	env.setSnapshot("other", "")
+
+	env.backUp(t, "home")
+
+	// Snapshot start times are kept in whole seconds: wait so that other's
+	// snapshot is strictly the most recent.
+	time.Sleep(time.Second)
+
+	extra := filepath.Join(env.src, "extra.txt")
+	require.NoError(t, os.WriteFile(extra, []byte("extra"), 0o600))
+	env.backUp(t, "other")
+	require.NoError(t, os.Remove(extra))
+
+	assert.Contains(t, env.backUp(t, "home"), filesLine(1, 0, 1))
+}
+
+// A file removed from disk is counted as deleted by the next backup of
+// the snapshot that had it, and not by any later backup of that
+// snapshot, nor by the first backup of another name over the same path.
+func TestBackupCountsDeletedFileOnce(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	aContent := bytes.Repeat([]byte("a"), 1000)
+	bContent := bytes.Repeat([]byte("b"), 2000)
+	keptContent := bytes.Repeat([]byte("k"), 500)
+
+	env := newDeletedCountEnv(t, map[string][]byte{
+		"a.txt":    aContent,
+		"b.txt":    bContent,
+		"kept.txt": keptContent,
+	})
+	env.setSnapshot("home", "")
+	env.setSnapshot("other", "")
+
+	assert.Contains(t, env.backUp(t, "home"), filesLine(3, 3, 0))
+
+	require.NoError(t, os.Remove(filepath.Join(env.src, "a.txt")))
+	require.NoError(t, os.Remove(filepath.Join(env.src, "b.txt")))
+
+	summary := env.backUp(t, "home")
+	assert.Contains(t, summary,
+		"Files: 1 examined, 0 backed up, 1 unchanged, 2 deleted.")
+	assert.Contains(t, summary,
+		fmt.Sprintf("Data: %s total (%s backed up), %s deleted.",
+			env.v.UI.Size(int64(len(keptContent))), env.v.UI.Size(0),
+			env.v.UI.Size(int64(len(aContent)+len(bContent)))))
+
+	assert.Contains(t, env.backUp(t, "home"), filesLine(1, 0, 1))
+	assert.Contains(t, env.backUp(t, "other"), filesLine(1, 0, 1))
+}

internal/vaultik/snapshot_list.go

@@ -553,8 +553,8 @@ func (v *Vaultik) printSnapshotTable(snapshots []SnapshotInfo) error {
 
 		if snap.LocallyTracked {
 			id = snap.ID.String()
-			uncompressed = ubytes(snap.UncompressedSize)
-			newChunks = ubytes(snap.NewChunkSize)
+			uncompressed = formatBytes(snap.UncompressedSize)
+			newChunks = formatBytes(snap.NewChunkSize)
 		} else {
 			id = formatRemoteOnlyID(snap.RemoteKey)
 			uncompressed = remoteOnlyCell
@@ -564,7 +564,7 @@ func (v *Vaultik) printSnapshotTable(snapshots []SnapshotInfo) error {
 		_, err = fmt.Fprintf(w, "%s\t%s\t%s\t%s\t%s\n",
 			id,
 			snap.Timestamp.Format("2006-01-02 15:04:05"),
-			ubytes(snap.CompressedSize),
+			formatBytes(snap.CompressedSize),
 			uncompressed,
 			newChunks)
 		if err != nil {

internal/vaultik/snapshot_list_test.go

@@ -212,8 +212,8 @@ const (
 	listConfiguredName = "home"
 	listLocalID        = "testhost_home_2026-03-01T10:00:00Z"
 	listRemoteID       = "otherhost_media_2026-03-02T11:22:33Z"
-	// fiveMegabytes is printed as "5.0 MB" by every command.
-	fiveMegabytes = 5_000_000
+	// fiveMegabytes formats as "5.0 MB" through formatBytes.
+	fiveMegabytes = 5 * 1024 * 1024
 )
 
 // TestListSnapshots_RemoteWithoutSecretKey is the regression guard for
@@ -306,48 +306,6 @@ func TestListSnapshots_RemoteOnlyRowRendering(t *testing.T) {
 		"are not in the local index")
 }
 
-// TestSnapshotListAndPurgePrintSizesLikeRemoteInfo checks that the
-// `snapshot list` table and the purge listing print a byte count the way
-// `remote info` does: in powers of 1000, as the MB label says.
-func TestSnapshotListAndPurgePrintSizesLikeRemoteInfo(t *testing.T) {
-	log.Initialize(log.Config{})
-	t.Parallel()
-
-	const wantSize = "5.0 MB" // fiveMegabytes
-
-	env := newListEnv(t)
-
-	// A remote-only snapshot: `snapshot list` and `remote info` both take
-	// its size from the manifest.
-	remoteKey := env.addRemote(t, listRemoteID,
-		time.Date(2026, 3, 2, 11, 22, 33, 0, time.UTC))
-
-	// A locally tracked snapshot of the same size for the purge to list.
-	// The purge prints the snapshot's blob size, the last argument here.
-	start := time.Date(2026, 3, 1, 10, 0, 0, 0, time.UTC)
-	env.addLocal(t, listLocalID, start)
-	env.addRemote(t, listLocalID, start)
-	require.NoError(t, env.v.Repositories.Snapshots.UpdateCounts(
-		context.Background(), nil, listLocalID, 0, 0, 0, 0, fiveMegabytes))
-
-	require.NoError(t, env.v.RemoteInfo(false))
-	assert.Contains(t, findTableRow(t, env.stdout.String(), remoteKey[:16]),
-		wantSize, "remote info")
-
-	env.stdout.Reset()
-	require.NoError(t, env.v.ListSnapshots(false))
-	assert.Contains(t, findTableRow(t, env.stdout.String(),
-		"<remote only:"+remoteKey[:12]+">"), wantSize, "snapshot list")
-
-	// Without --force and with nothing on stdin the purge lists what it
-	// would delete, reads no confirmation, and deletes nothing.
-	env.stdout.Reset()
-	require.NoError(t, env.v.PurgeSnapshotsWithOptions(
-		&vaultik.SnapshotPurgeOptions{OlderThan: "1d"}))
-	assert.Contains(t, findTableRow(t, env.stdout.String(), listLocalID),
-		wantSize, "snapshot purge")
-}
-
 // findTableRow returns the single output line containing needle.
 func findTableRow(t *testing.T, out, needle string) string {
 	t.Helper()
@@ -487,7 +445,6 @@ type listJSONRow struct {
 	RemoteKey      string `json:"remote_key"`
 	Timestamp      string `json:"timestamp"`
 	CompressedSize int64  `json:"compressed_size"`
-	NewChunkSize   int64  `json:"new_chunk_size"`
 	LocallyTracked bool   `json:"locally_tracked"`
 	RemotePresent  *bool  `json:"remote_present"`
 }

internal/vaultik/verify.go

@@ -57,25 +57,11 @@ type VerifyResult struct {
 	Missing     int    `json:"missing"`
 	MissingSize int64  `json:"missing_size,omitempty"`
 	Mismatched  int    `json:"mismatched,omitempty"`
-	// Unchecked lists the blobs shallow verify could not check, because
-	// storage answered with an error other than not-found, so whether
-	// they are present is unknown.
-	Unchecked []UncheckedBlob `json:"unchecked,omitempty"`
 	// DatabaseMissing is set by shallow verify when the snapshot's
 	// encrypted database (metadata/<key>/db.zst.age) is absent, which
 	// makes the snapshot unrestorable regardless of the blobs.
-	DatabaseMissing bool `json:"database_missing,omitempty"`
-	// DatabaseCheckError is set by shallow verify to the error storage
-	// returned when the encrypted database could not be checked.
-	DatabaseCheckError string `json:"database_check_error,omitempty"`
-	ErrorMessage       string `json:"error,omitempty"`
-}
-
-// UncheckedBlob is a blob shallow verify could not check, with the error
-// storage returned for it.
-type UncheckedBlob struct {
-	Hash  string `json:"hash"`
-	Error string `json:"error"`
+	DatabaseMissing bool   `json:"database_missing,omitempty"`
+	ErrorMessage    string `json:"error,omitempty"`
 }
 
 // deepVerifyFailure records a failure in the result and returns it appropriately