List a file:// destination through a symlinked directory (closes #296)

List and ListStream walked the destination with afero.Walk, which uses
Lstat and so reported a symlinked metadata/ or blobs/ directory as one
file, while Put, Get and Stat follow the link. The store then listed as
empty, and prune removed the local snapshot records and deleted every
blob. Both listings now walk a view of the filesystem without its Lstat
method, so afero falls back to Stat and enters the link. A listed prefix
that is a symlink whose target is missing, such as a link to a volume
that is not mounted, fails the listing, as a missing destination
directory does.

A symlink loop is not detected: it is followed until the system refuses
the path for too many levels of links, and the listing fails.

Model: opus-5-5

README.md

@@ -349,9 +349,11 @@ the backup destination store. Blobs are NOT touched — deleting blobs
 requires reading every remaining remote manifest (the destination store
 may hold snapshots this host doesn't know about), which is what
 `vaultik prune` does. On success the command prints the exact `vaultik
-prune` invocation to run as a follow-up. Local row cleanup (files,
+prune` invocation to run as a follow-up. An ID that names no snapshot in
-chunks, blobs the snapshot was the last referrer for) runs
+the local index or on the destination store is an error; with
-automatically. If the destination store is unreachable, the local-DB
+`--local-only`, the snapshot must be in the local index. Local row
+cleanup (files, chunks, blobs the snapshot was the last referrer for)
+runs automatically. If the destination store is unreachable, the local-DB
 removal still completes and a warning is emitted; run `vaultik snapshot
 remove <snapshot-id>` again once the store is reachable to remove the
 snapshot's metadata from it (`vaultik prune` does not). To wipe everything
@@ -399,7 +401,9 @@ orphaned blob figures are reported as unknown; `--json` gives them as
 `null`, lists the remote key of each unreadable manifest in
 `unreadable_manifests` and counts the manifests under skipped names in
 `skipped_manifest_count`. An unreadable manifest also leaves its
-snapshot's blob count and blob size unknown, `null` in `--json`.
+snapshot's blob count and blob size unknown, `null` in `--json`. A file
+under `blobs/` whose name is not a blob hash is not counted as a blob,
+since `prune` never deletes it.
 * `--json`: Output as JSON
 
 **`remote nuke`**: Delete every snapshot's metadata and every blob from the
@@ -412,7 +416,8 @@ destination store.
 entirely. Remote storage is unaffected; the next backup will do a full
 scan and re-deduplicate against existing remote blobs, and the local
 index will re-bind to the currently configured storage destination.
-Use this after changing `storage_url` to a different destination.
+Use this after changing `storage_url`, or `s3.endpoint`, `s3.bucket` or
+`s3.prefix`, to a different destination.
 * `--force`: Skip confirmation prompt
 
 ---

TODO.md

@@ -22,6 +22,69 @@ the tag exists and is exercised; what is left is merging `next` to
 
 # Completed Steps
 
+- 2026-10-13: Made a `file://` destination list through a symlinked
+  directory ([issue #296](https://git.eeqj.de/sneak/vaultik/issues/296)).
+  A `metadata/` or `blobs/` directory that was a symlink to a directory
+  elsewhere was listed as one file, so the destination store listed as
+  empty while backups and restores still worked through the link.
+  `prune` then removed the local snapshot records and deleted every blob,
+  and `remote info` and `remote nuke` found no blobs. The listings now
+  read through the link as `Get` and `Stat` do. A link whose target is
+  missing, such as one to a volume that is not mounted, or a link
+  pointing back up the tree makes them fail.
+
+- 2026-10-13: Stopped `remote info` counting a file under `blobs/` that
+  is not a blob as an orphaned blob
+  ([issue #295](https://git.eeqj.de/sneak/vaultik/issues/295)). A stray
+  file such as `.DS_Store` was reported as an orphaned blob and the
+  report advised running `prune`, which skips such a file and deleted
+  nothing. `remote info` now takes its blob list from the same listing
+  `prune` uses, in the table and in `--json`.
+
+- 2026-10-13: Made `snapshot remove` fail for a snapshot that does not
+  exist ([issue #293](https://git.eeqj.de/sneak/vaultik/issues/293)).
+  The command never checked the ID: it reported the snapshot removed
+  from the local database and from the destination store and exited 0,
+  under `--json`, `--dry-run` and `--local-only` too. An ID that names
+  no snapshot in the local index or on the destination store is now an
+  error; with `--local-only`, the snapshot must be in the local index.
+  The command now reports a removal from either side only when one
+  happened, and `remote_removed` is true only when metadata was deleted.
+
+- 2026-10-12: Bound the local index to the destination an `s3.*` config
+  names ([issue #298](https://git.eeqj.de/sneak/vaultik/issues/298)).
+  Only `storage_url` was checked, so after `s3.bucket` or `s3.prefix`
+  changed, the next backup treated every chunk as already stored,
+  uploaded nothing, and completed a snapshot that could not be restored.
+  Without `storage_url`, the local index is now bound to `s3.endpoint`,
+  `s3.bucket` and `s3.prefix`, and a change is refused as a changed
+  `storage_url` is.
+
+- 2026-10-12: Rejected a retention duration longer than about 292 years
+  ([issue #289](https://git.eeqj.de/sneak/vaultik/issues/289)). The
+  number given to `--older-than` or `--keep-newer-than` was multiplied
+  by the length of its unit with no limit, so from `293y`, `15251w`,
+  `3559mo` or `106752d`, or a sum of parts such as `200y200y`, the
+  result wrapped to a negative duration. The cutoff then lay in the
+  future, every snapshot of the name was deleted, the one just made
+  included, and the command exited 0. Such a duration is now rejected
+  as invalid and nothing is deleted.
+
+- 2026-10-08: Made a backup cancelled under `--skip-errors` stop at once
+  ([issue #286](https://git.eeqj.de/sneak/vaultik/issues/286)). After
+  Ctrl-C or SIGTERM, phase 2 treated the cancellation error from each
+  remaining file like an unreadable file: it opened the file, printed an
+  error line for it, counted it as failed and went on to the next one.
+  The run now stops at the first file after the cancellation, and no
+  file is counted as failed because of it.
+
+- 2026-10-08: Made `remote nuke` delete the `.partial` files that
+  uploads cut off part-way leave on the destination store
+  ([issue #281](https://git.eeqj.de/sneak/vaultik/issues/281)). The
+  file and rclone listings skip such a file, so the command left it in
+  place and still reported the store empty. It now removes them under
+  `metadata/` and `blobs/` as its last step.
+
 - 2026-10-08: Made a local index error while recording a directory or
   symlink stop a backup under `--skip-errors`
   ([issue #284](https://git.eeqj.de/sneak/vaultik/issues/284)). Phase 2

internal/cli/snapshot.go

@@ -255,8 +255,12 @@ manifest (the destination store may hold snapshots this host doesn't
 know about), which is what 'vaultik prune' does. On success the command
 prints the exact 'vaultik prune' invocation to run as a follow-up.
 
+An ID that names no snapshot in the local index or on the destination
+store is an error.
+
 Use --local-only to skip the remote half (e.g. when you want to forget a
-snapshot locally without touching the destination store).
+snapshot locally without touching the destination store); the snapshot
+must then be in the local index.
 
 If the remote is unreachable, the local-database removal still completes
 and a warning is emitted; run 'vaultik snapshot remove <snapshot-id>' again

internal/snapshot/scanner.go

@@ -1312,6 +1312,13 @@ func (s *Scanner) processPhase(
 
 	// Process each file
 	for _, fileToProcess := range filesToProcess {
+		// Check context cancellation
+		select {
+		case <-ctx.Done():
+			return ctx.Err()
+		default:
+		}
+
 		// Update progress
 		if s.progress != nil {
 			s.progress.GetStats().CurrentFile.Store(fileToProcess.Path)
@@ -1369,6 +1376,11 @@ func (s *Scanner) processFileWithErrorHandling(
 
 	err := s.processFileStreaming(ctx, fileToProcess, result)
 	if err != nil {
+		// A cancelled run stops here even under --skip-errors, rather than
+		// counting this file as failed and going on to the next one.
+		if ctx.Err() != nil {
+			return false, fmt.Errorf("processing file %s: %w", fileToProcess.Path, err)
+		}
 		// A packer/database/encryption/upload failure means the chunk's data
 		// may not have been stored. Skipping the file would let the snapshot
 		// record a file whose chunk is in no blob and cannot be restored, so

internal/snapshot/skip_errors_test.go

@@ -82,6 +82,32 @@ func (f *readFailFs) Open(name string) (afero.File, error) {
 	return file, nil
 }
 
+// cancelOnOpenFs cancels the run when the scanner opens the target file to
+// back it up, as Ctrl-C partway through processing would, and records each
+// file opened after that.
+type cancelOnOpenFs struct {
+	afero.Fs
+
+	target            string
+	cancel            context.CancelFunc
+	cancelled         bool
+	openedAfterCancel []string
+}
+
+//nolint:ireturn // afero.Fs.Open is defined to return the interface.
+func (f *cancelOnOpenFs) Open(name string) (afero.File, error) {
+	if f.cancelled {
+		f.openedAfterCancel = append(f.openedAfterCancel, name)
+	}
+
+	if name == f.target {
+		f.cancel()
+		f.cancelled = true
+	}
+
+	return f.Fs.Open(name)
+}
+
 // linkRemovedAfterLstatFs is the real filesystem, except that the symlink at
 // target is removed right after the walk lstats it, as happens when a link is
 // deleted during a backup. The scanner's readlink of it then fails.
@@ -128,15 +154,16 @@ func writeSkipErrorTestFile(t *testing.T, fs afero.Fs, path, content string) {
 	}
 }
 
-// runSkipErrorScan scans source on fs with the given skip-errors setting,
+// runSkipErrorScan scans source on fs under ctx with the given skip-errors
-// printing user-facing messages to uiw (nil discards them), and returns the
+// setting, printing user-facing messages to uiw (nil discards them), and
-// repositories (for inspection) and the scan error.
+// returns the repositories (for inspection) and the scan error.
 func runSkipErrorScan(
-	t *testing.T, fs afero.Fs, source string, skipErrors bool, uiw *ui.Writer,
+	ctx context.Context, t *testing.T, fs afero.Fs, source string,
+	skipErrors bool, uiw *ui.Writer,
 ) (*database.Repositories, error) {
 	t.Helper()
 
-	db, err := database.NewTestDB()
+	db, err := database.New(ctx, ":memory:")
 	if err != nil {
 		t.Fatalf("create test db: %v", err)
 	}
@@ -161,7 +188,6 @@ func runSkipErrorScan(
 		SkipErrors:       skipErrors,
 	})
 
-	ctx := context.Background()
 	snapshotID := "test-snapshot-skip-errors"
 	createTestSnapshotRecord(ctx, t, repos, snapshotID)
 
@@ -185,7 +211,7 @@ func TestScannerPackingFailureAbortsUnderSkipErrors(t *testing.T) {
 	writeSkipErrorTestFile(t, fs, "/source/file1.txt", "first file content")
 	writeSkipErrorTestFile(t, fs, "/source/file2.txt", "second file content")
 
-	repos, err := runSkipErrorScan(t, fs, "/source", true, nil)
+	repos, err := runSkipErrorScan(context.Background(), t, fs, "/source", true, nil)
 	if err == nil {
 		t.Fatal("expected scan to abort on the packer error, got nil")
 	}
@@ -212,7 +238,7 @@ func TestScannerReadErrorAbortsWithoutSkipErrors(t *testing.T) {
 	fs := &readFailFs{Fs: afero.NewMemMapFs(), target: target}
 	writeSkipErrorTestFile(t, fs, target, "content that cannot be read")
 
-	_, err := runSkipErrorScan(t, fs, "/source", false, nil)
+	_, err := runSkipErrorScan(context.Background(), t, fs, "/source", false, nil)
 	if err == nil {
 		t.Fatal("expected scan to fail on the read error, got nil")
 	}
@@ -228,7 +254,7 @@ func TestScannerReadErrorSkippedWithSkipErrors(t *testing.T) {
 	fs := &readFailFs{Fs: afero.NewMemMapFs(), target: target}
 	writeSkipErrorTestFile(t, fs, target, "content that cannot be read")
 
-	repos, err := runSkipErrorScan(t, fs, "/source", true, nil)
+	repos, err := runSkipErrorScan(context.Background(), t, fs, "/source", true, nil)
 	if err != nil {
 		t.Fatalf("expected scan to complete with --skip-errors, got %v", err)
 	}
@@ -267,7 +293,7 @@ func TestScannerUnreadableSymlinkAbortsWithoutSkipErrors(t *testing.T) {
 	sourceDir, linkPath := writeSymlinkSource(t)
 	fs := &linkRemovedAfterLstatFs{t: t, target: linkPath}
 
-	_, err := runSkipErrorScan(t, fs, sourceDir, false, nil)
+	_, err := runSkipErrorScan(context.Background(), t, fs, sourceDir, false, nil)
 	if !errors.Is(err, os.ErrNotExist) {
 		t.Fatalf("expected scan to fail on the removed symlink, got %v", err)
 	}
@@ -283,7 +309,7 @@ func TestScannerUnreadableSymlinkSkippedWithSkipErrors(t *testing.T) {
 	fs := &linkRemovedAfterLstatFs{t: t, target: linkPath}
 	uiw := ui.NewWithColor(io.Discard, false)
 
-	repos, err := runSkipErrorScan(t, fs, sourceDir, true, uiw)
+	repos, err := runSkipErrorScan(context.Background(), t, fs, sourceDir, true, uiw)
 	if err != nil {
 		t.Fatalf("expected scan to complete with --skip-errors, got %v", err)
 	}
@@ -302,3 +328,56 @@ func TestScannerUnreadableSymlinkSkippedWithSkipErrors(t *testing.T) {
 		t.Fatalf("expected %s not to be recorded", linkPath)
 	}
 }
+
+// TestScannerCancelStopsSkipErrorsRun checks that a --skip-errors backup
+// cancelled partway through processing returns the cancellation error,
+// opens no further file, and reports no file as failed.
+func TestScannerCancelStopsSkipErrorsRun(t *testing.T) {
+	t.Parallel()
+
+	tests := []struct {
+		name          string
+		targetContent string
+	}{
+		// The cancellation lands while the target is being read.
+		{name: "while reading a file", targetContent: "first file content"},
+		// An empty target has no chunks, so the cancellation goes unnoticed
+		// until the run moves on to the next file.
+		{name: "between files", targetContent: ""},
+	}
+
+	for _, tt := range tests {
+		t.Run(tt.name, func(t *testing.T) {
+			t.Parallel()
+
+			const target = "/source/a.txt"
+
+			ctx, cancel := context.WithCancel(context.Background())
+			defer cancel()
+
+			fs := &cancelOnOpenFs{
+				Fs: afero.NewMemMapFs(), target: target, cancel: cancel,
+			}
+			writeSkipErrorTestFile(t, fs, target, tt.targetContent)
+			writeSkipErrorTestFile(t, fs, "/source/b.txt", "second file content")
+			writeSkipErrorTestFile(t, fs, "/source/c.txt", "third file content")
+
+			uiw := ui.NewWithColor(io.Discard, false)
+
+			_, err := runSkipErrorScan(ctx, t, fs, "/source", true, uiw)
+			if !errors.Is(err, context.Canceled) {
+				t.Fatalf("expected the cancellation error, got %v", err)
+			}
+
+			if len(fs.openedAfterCancel) != 0 {
+				t.Fatalf("expected no file opened after the cancellation, got %v",
+					fs.openedAfterCancel)
+			}
+
+			if uiw.ErrorCount() != 0 {
+				t.Fatalf("expected no file reported as failed, got %d error lines",
+					uiw.ErrorCount())
+			}
+		})
+	}
+}

internal/storage/faultstore/faultstore.go

@@ -171,6 +171,11 @@ func (f *Storer) ListStream(
 	return f.inner.ListStream(ctx, prefix)
 }
 
+// DeletePartialUploads delegates unchanged.
+func (f *Storer) DeletePartialUploads(ctx context.Context, prefix string) error {
+	return f.inner.DeletePartialUploads(ctx, prefix)
+}
+
 // Info delegates unchanged.
 func (f *Storer) Info() storage.Info {
 	return f.inner.Info()

internal/storage/file.go

@@ -120,9 +120,10 @@ func (f *FileStorer) Delete(_ context.Context, key string) error {
 	return nil
 }
 
-// List returns all keys with the given prefix. It fails when the
+// List returns all keys with the given prefix, reading through symlinked
-// destination directory is missing; a missing prefix under it is an
+// directories. It fails when the destination directory is missing or the
-// empty listing.
+// prefix is a symlink whose target is missing; a missing prefix under the
+// destination directory is an empty listing.
 func (f *FileStorer) List(ctx context.Context, prefix string) ([]string, error) {
 	var keys []string
 
@@ -133,8 +134,7 @@ func (f *FileStorer) List(ctx context.Context, prefix string) ([]string, error)
 
 	basePath := f.fullPath(prefix)
 
-	// Check if the prefix exists
+	exists, err := f.prefixExists(basePath)
-	exists, err := afero.Exists(f.fs, basePath)
 	if err != nil {
 		return nil, fmt.Errorf("checking path: %w", err)
 	}
@@ -143,7 +143,7 @@ func (f *FileStorer) List(ctx context.Context, prefix string) ([]string, error)
 		return keys, nil // Empty list for non-existent prefix
 	}
 
-	err = afero.Walk(f.fs, basePath, func(path string, info os.FileInfo, err error) error {
+	err = f.walk(basePath, func(path string, info os.FileInfo, err error) error {
 		if err != nil {
 			return err
 		}
@@ -176,7 +176,9 @@ func (f *FileStorer) List(ctx context.Context, prefix string) ([]string, error)
 }
 
 // ListStream returns a channel of ObjectInfo for large result sets. Like
-// List, it sends an error when the destination directory is missing.
+// List, it reads through symlinked directories and sends an error when
+// the destination directory is missing or the prefix is a symlink whose
+// target is missing.
 func (f *FileStorer) ListStream(ctx context.Context, prefix string) <-chan ObjectInfo {
 	ch := make(chan ObjectInfo)
 
@@ -192,8 +194,7 @@ func (f *FileStorer) ListStream(ctx context.Context, prefix string) <-chan Objec
 
 		basePath := f.fullPath(prefix)
 
-		// Check if the prefix exists
+		exists, err := f.prefixExists(basePath)
-		exists, err := afero.Exists(f.fs, basePath)
 		if err != nil {
 			ch <- ObjectInfo{Err: fmt.Errorf("checking path: %w", err)}
 
@@ -204,7 +205,7 @@ func (f *FileStorer) ListStream(ctx context.Context, prefix string) <-chan Objec
 			return // Empty channel for non-existent prefix
 		}
 
-		_ = afero.Walk(f.fs, basePath, func(path string, info os.FileInfo, err error) error {
+		_ = f.walk(basePath, func(path string, info os.FileInfo, err error) error {
 			// Check context cancellation
 			select {
 			case <-ctx.Done():
@@ -242,6 +243,42 @@ func (f *FileStorer) ListStream(ctx context.Context, prefix string) <-chan Objec
 	return ch
 }
 
+// DeletePartialUploads removes every file under prefix whose name ends in
+// tempSuffix. A missing prefix has none to remove.
+func (f *FileStorer) DeletePartialUploads(ctx context.Context, prefix string) error {
+	basePath := f.fullPath(prefix)
+
+	exists, err := afero.Exists(f.fs, basePath)
+	if err != nil {
+		return fmt.Errorf("checking path: %w", err)
+	}
+
+	if !exists {
+		return nil
+	}
+
+	err = afero.Walk(f.fs, basePath, func(path string, info os.FileInfo, err error) error {
+		if err != nil {
+			return err
+		}
+
+		if ctx.Err() != nil {
+			return ctx.Err()
+		}
+
+		if info.IsDir() || !strings.HasSuffix(info.Name(), tempSuffix) {
+			return nil
+		}
+
+		return f.fs.Remove(path)
+	})
+	if err != nil {
+		return fmt.Errorf("walking directory: %w", err)
+	}
+
+	return nil
+}
+
 // Info returns human-readable storage location information.
 func (f *FileStorer) Info() Info {
 	return Info{
@@ -316,6 +353,40 @@ func (f *FileStorer) writeAtomic(
 	return nil
 }
 
+// walk is afero.Walk, except that it reads through a symlinked directory
+// the way Get and Stat do, where afero.Walk reports the link as one file.
+// afero.Walk uses Lstat, which does not follow a link, whenever the
+// filesystem has one; the struct below carries only the afero.Fs methods,
+// so the walk uses Stat instead. A link back up the tree is followed until
+// the operating system refuses the path for too many levels of links, and
+// the walk then fails.
+func (f *FileStorer) walk(root string, fn filepath.WalkFunc) error {
+	return afero.Walk(struct{ afero.Fs }{f.fs}, root, fn)
+}
+
+// prefixExists is afero.Exists, except that it does not follow a symlink
+// at path. A symlinked prefix whose target is missing, such as a link to
+// a volume that is not mounted, therefore exists, and walk then fails on
+// it; with afero.Exists it would list as empty, and prune would delete
+// every blob.
+func (f *FileStorer) prefixExists(path string) (bool, error) {
+	lstater, ok := f.fs.(afero.Lstater)
+	if !ok {
+		return afero.Exists(f.fs, path)
+	}
+
+	_, _, err := lstater.LstatIfPossible(path)
+	if err == nil {
+		return true, nil
+	}
+
+	if os.IsNotExist(err) {
+		return false, nil
+	}
+
+	return false, err
+}
+
 // fullPath returns the full filesystem path for a key.
 func (f *FileStorer) fullPath(key string) string {
 	return filepath.Join(f.basePath, key)

internal/storage/file_atomic_test.go

@@ -120,3 +120,45 @@ func TestFileStorer_ListSkipsPartialFiles(t *testing.T) {
 		t.Fatalf("ListStream should return only the real key, got %v", streamed)
 	}
 }
+
+// TestFileStorer_DeletePartialUploads checks that a leftover temp file is
+// removed and the object at the real key is kept.
+func TestFileStorer_DeletePartialUploads(t *testing.T) {
+	t.Parallel()
+
+	base := t.TempDir()
+
+	f, err := storage.NewFileStorer(base)
+	if err != nil {
+		t.Fatalf("NewFileStorer: %v", err)
+	}
+
+	ctx := context.Background()
+
+	err = f.Put(ctx, testBlobKey, strings.NewReader("blob-bytes"))
+	if err != nil {
+		t.Fatalf("Put: %v", err)
+	}
+
+	leftover := filepath.Join(base, testBlobKey+"-123456.partial")
+
+	err = os.WriteFile(leftover, []byte("half"), 0o600)
+	if err != nil {
+		t.Fatalf("writing leftover temp file: %v", err)
+	}
+
+	err = f.DeletePartialUploads(ctx, "blobs/")
+	if err != nil {
+		t.Fatalf("DeletePartialUploads: %v", err)
+	}
+
+	_, err = os.Stat(leftover)
+	if !os.IsNotExist(err) {
+		t.Errorf("leftover temp file was not removed: %v", err)
+	}
+
+	_, err = f.Stat(ctx, testBlobKey)
+	if err != nil {
+		t.Errorf("Stat of the real key: %v", err)
+	}
+}

internal/storage/file_backend_test.go

@@ -4,7 +4,10 @@ import (
 	"context"
 	"errors"
 	"io/fs"
+	"os"
 	"path/filepath"
+	"reflect"
+	"strings"
 	"testing"
 
 	"sneak.berlin/go/vaultik/internal/storage"
@@ -60,3 +63,151 @@ func TestFileStorerListMissingDestination(t *testing.T) {
 		t.Errorf("ListStream error = %v, want a not-exist error", streamErr)
 	}
 }
+
+// TestFileStorerListsThroughSymlinkedDirectory checks that List and
+// ListStream read through a symlinked metadata/ or blobs/ directory, as Get
+// and Stat do, instead of listing the link as one key. Listing the whole
+// destination meets the link part-way through the walk; listing its prefix
+// starts the walk at the link.
+func TestFileStorerListsThroughSymlinkedDirectory(t *testing.T) {
+	t.Parallel()
+
+	for _, dir := range []string{"metadata", "blobs"} {
+		t.Run(dir, func(t *testing.T) {
+			t.Parallel()
+
+			base := t.TempDir()
+			key := dir + "/aa/bb/object"
+
+			s, err := storage.NewFileStorer(base)
+			if err != nil {
+				t.Fatalf("NewFileStorer: %v", err)
+			}
+
+			err = s.Put(context.Background(), key, strings.NewReader("data"))
+			if err != nil {
+				t.Fatalf("Put: %v", err)
+			}
+
+			linkPath := filepath.Join(base, dir)
+			movedPath := filepath.Join(t.TempDir(), dir)
+
+			err = os.Rename(linkPath, movedPath)
+			if err != nil {
+				t.Fatalf("moving %s away: %v", dir, err)
+			}
+
+			err = os.Symlink(movedPath, linkPath)
+			if err != nil {
+				t.Fatalf("linking %s: %v", dir, err)
+			}
+
+			want := []string{key}
+
+			for _, prefix := range []string{"", dir + "/"} {
+				got := listSorted(t, s, prefix)
+				if !reflect.DeepEqual(got, want) {
+					t.Errorf("List(%q) = %v, want %v", prefix, got, want)
+				}
+
+				got = listStreamKeys(t, s, prefix)
+				if !reflect.DeepEqual(got, want) {
+					t.Errorf("ListStream(%q) = %v, want %v", prefix, got, want)
+				}
+			}
+		})
+	}
+}
+
+// TestFileStorerListFailsOnSymlinkWithMissingTarget checks that List and
+// ListStream fail on a symlinked metadata/ or blobs/ directory whose target
+// is missing, such as a link to a volume that is not mounted, as they do on
+// a missing destination directory, instead of listing it as empty.
+func TestFileStorerListFailsOnSymlinkWithMissingTarget(t *testing.T) {
+	t.Parallel()
+
+	ctx := context.Background()
+
+	for _, dir := range []string{"metadata", "blobs"} {
+		t.Run(dir, func(t *testing.T) {
+			t.Parallel()
+
+			base := t.TempDir()
+
+			s, err := storage.NewFileStorer(base)
+			if err != nil {
+				t.Fatalf("NewFileStorer: %v", err)
+			}
+
+			unmounted := filepath.Join(t.TempDir(), "unmounted")
+
+			err = os.Symlink(unmounted, filepath.Join(base, dir))
+			if err != nil {
+				t.Fatalf("Symlink: %v", err)
+			}
+
+			for _, prefix := range []string{"", dir + "/"} {
+				keys, err := s.List(ctx, prefix)
+				if !errors.Is(err, fs.ErrNotExist) {
+					t.Errorf("List(%q) = %v, %v; want a not-exist error",
+						prefix, keys, err)
+				}
+
+				var streamErr error
+
+				for object := range s.ListStream(ctx, prefix) {
+					if object.Err != nil {
+						streamErr = object.Err
+					}
+				}
+
+				if !errors.Is(streamErr, fs.ErrNotExist) {
+					t.Errorf("ListStream(%q) error = %v, want a not-exist error",
+						prefix, streamErr)
+				}
+			}
+		})
+	}
+}
+
+// TestFileStorerListFailsOnSymlinkLoop checks that a symlink pointing back
+// at the destination makes List and ListStream fail instead of walking it
+// forever.
+func TestFileStorerListFailsOnSymlinkLoop(t *testing.T) {
+	t.Parallel()
+
+	ctx := context.Background()
+	base := t.TempDir()
+
+	s, err := storage.NewFileStorer(base)
+	if err != nil {
+		t.Fatalf("NewFileStorer: %v", err)
+	}
+
+	err = s.Put(ctx, testBlobKey, strings.NewReader("data"))
+	if err != nil {
+		t.Fatalf("Put: %v", err)
+	}
+
+	err = os.Symlink(base, filepath.Join(base, "blobs", "loop"))
+	if err != nil {
+		t.Fatalf("Symlink: %v", err)
+	}
+
+	keys, err := s.List(ctx, "blobs/")
+	if err == nil {
+		t.Errorf("List = %d keys and no error, want an error", len(keys))
+	}
+
+	var streamErr error
+
+	for object := range s.ListStream(ctx, "blobs/") {
+		if object.Err != nil {
+			streamErr = object.Err
+		}
+	}
+
+	if streamErr == nil {
+		t.Error("ListStream sent no error, want one")
+	}
+}

internal/storage/rclone.go

@@ -213,6 +213,31 @@ func (r *RcloneStorer) ListStream(
 	return ch
 }
 
+// DeletePartialUploads removes every object under prefix whose name ends
+// in tempSuffix.
+func (r *RcloneStorer) DeletePartialUploads(ctx context.Context, prefix string) error {
+	var partial []fs.Object
+
+	err := operations.ListFn(ctx, r.fsys, func(obj fs.Object) {
+		key := obj.Remote()
+		if strings.HasPrefix(key, prefix) && strings.HasSuffix(key, tempSuffix) {
+			partial = append(partial, obj)
+		}
+	})
+	if err != nil {
+		return fmt.Errorf("listing objects: %w", err)
+	}
+
+	for _, obj := range partial {
+		err = obj.Remove(ctx)
+		if err != nil {
+			return fmt.Errorf("removing object: %w", err)
+		}
+	}
+
+	return nil
+}
+
 // Info returns human-readable storage location information.
 func (r *RcloneStorer) Info() Info {
 	location := r.remote

internal/storage/rclone_test.go

@@ -198,6 +198,47 @@ func TestRcloneStorerListSkipsPartialFiles(t *testing.T) {
 	}
 }
 
+// TestRcloneStorerDeletePartialUploads checks that a temporary file left
+// by a killed upload is removed and the object at the real key is kept.
+//
+//nolint:paralleltest // NewRcloneStorer installs the process-global rclone config
+func TestRcloneStorerDeletePartialUploads(t *testing.T) {
+	dir := t.TempDir()
+	ctx := context.Background()
+
+	s, err := storage.NewRcloneStorer(ctx, ":local", dir)
+	if err != nil {
+		t.Fatalf("NewRcloneStorer: %v", err)
+	}
+
+	err = s.Put(ctx, testBlobKey, strings.NewReader("blob-bytes"))
+	if err != nil {
+		t.Fatalf("Put: %v", err)
+	}
+
+	leftover := filepath.Join(dir, testBlobKey+"-123456.partial")
+
+	err = os.WriteFile(leftover, []byte("half"), 0o600)
+	if err != nil {
+		t.Fatalf("writing leftover temp file: %v", err)
+	}
+
+	err = s.DeletePartialUploads(ctx, "blobs/")
+	if err != nil {
+		t.Fatalf("DeletePartialUploads: %v", err)
+	}
+
+	_, err = os.Stat(leftover)
+	if !os.IsNotExist(err) {
+		t.Errorf("leftover temp file was not removed: %v", err)
+	}
+
+	_, err = s.Stat(ctx, testBlobKey)
+	if err != nil {
+		t.Errorf("Stat of the real key: %v", err)
+	}
+}
+
 // newRcloneStorerOnWrappedLocal registers name as rclone's local backend
 // wrapped by wrap, and builds an rclone backend on it rooted at a fresh
 // temp directory. wrap changes the features the local backend reports, so

internal/storage/s3.go

@@ -99,6 +99,12 @@ func (s *S3Storer) ListStream(ctx context.Context, prefix string) <-chan ObjectI
 	return ch
 }
 
+// DeletePartialUploads has nothing to remove: S3 shows an object only once
+// its upload has completed, so an upload cut off part-way leaves none.
+func (s *S3Storer) DeletePartialUploads(_ context.Context, _ string) error {
+	return nil
+}
+
 // Info returns human-readable storage location information.
 func (s *S3Storer) Info() Info {
 	return Info{

internal/storage/storer.go

@@ -71,6 +71,12 @@ type Storer interface {
 	// If an error occurs during listing, the final item will have Err set.
 	ListStream(ctx context.Context, prefix string) <-chan ObjectInfo
 
+	// DeletePartialUploads removes every object under prefix that an
+	// upload cut off part-way left under a temporary name ending in
+	// `.partial`. The file and rclone backends' List and ListStream skip
+	// such an object.
+	DeletePartialUploads(ctx context.Context, prefix string) error
+
 	// Info returns human-readable storage location information.
 	Info() Info
 }

internal/vaultik/destination_validation_test.go

@@ -257,6 +257,10 @@ func (s *stubLister) List(_ context.Context, _ string) ([]string, error) {
 	return nil, errStubUnused
 }
 
+func (s *stubLister) DeletePartialUploads(_ context.Context, _ string) error {
+	return errStubUnused
+}
+
 func (s *stubLister) Info() storage.Info {
 	return storage.Info{}
 }

internal/vaultik/helpers.go

@@ -3,6 +3,7 @@ package vaultik
 import (
 	"errors"
 	"fmt"
+	"math"
 	"regexp"
 	"strconv"
 	"strings"
@@ -47,6 +48,10 @@ const (
 	year  = 365 * day
 )
 
+// maxDuration is the largest value a time.Duration can hold, about 292
+// years.
+const maxDuration = time.Duration(math.MaxInt64)
+
 // A snapshot ID split on "_" has at least a hostname and a trailing
 // timestamp.
 const minSnapshotIDParts = 2
@@ -145,10 +150,10 @@ func parseSnapshotName(snapshotID, hostname string) string {
 // parseDuration parses a duration string with support for human-friendly units:
 // d/day/days, w/week/weeks, mo/month/months, y/year/years, plus standard Go
 // duration units. Following Go, m is minutes and mo is months. A bare number,
-// an unknown unit, and a negative value are all rejected. Outside the Go
+// an unknown unit, a negative value, and a total longer than maxDuration are
-// units the input must be whole numbers each followed directly by a unit
+// all rejected. Outside the Go units the input must be whole numbers each
-// (2w3d), so 1.0y and 30 days are errors; decimals work only in Go units
+// followed directly by a unit (2w3d), so 1.0y and 30 days are errors;
-// (1.5h).
+// decimals work only in Go units (1.5h).
 func parseDuration(s string) (time.Duration, error) {
 	if strings.HasPrefix(strings.TrimSpace(s), "-") {
 		return 0, errNegativeDuration
@@ -181,19 +186,30 @@ func parseDuration(s string) (time.Duration, error) {
 			return 0, fmt.Errorf("invalid number %q: %w", match[1], err)
 		}
 
+		var unitLength time.Duration
+
 		unit := strings.ToLower(match[2])
 		switch unit {
 		case "d", "day", "days":
-			total += time.Duration(n) * day
+			unitLength = day
 		case "w", "week", "weeks":
-			total += time.Duration(n) * week
+			unitLength = week
 		case "mo", "month", "months":
-			total += time.Duration(n) * month
+			unitLength = month
 		case "y", "year", "years":
-			total += time.Duration(n) * year
+			unitLength = year
 		default:
 			return 0, fmt.Errorf("%w %q", errUnknownTimeUnit, unit)
 		}
+
+		// Past maxDuration the sum wraps to a negative value, which would
+		// put the purge cutoff in the future.
+		if time.Duration(n) > (maxDuration-total)/unitLength {
+			return 0, fmt.Errorf("%w: %q is longer than about 292 years",
+				errInvalidDuration, s)
+		}
+
+		total += time.Duration(n) * unitLength
 	}
 
 	return total, nil

internal/vaultik/helpers_test.go

@@ -111,6 +111,17 @@ func TestParseDuration(t *testing.T) {
 		{"30 days", 0, true},
 		{"30 days ago", 0, true},
 		{"x7d", 0, true},
+		// The largest time.Duration is about 292 years. A larger value
+		// must be rejected, not wrapped to a negative one, which would
+		// put the cutoff in the future and select every snapshot.
+		{"292y", 292 * 365 * 24 * time.Hour, false},
+		{"293y", 0, true},
+		{"3559mo", 0, true},
+		{"15251w", 0, true},
+		{"106752d", 0, true},
+		{"2562048h", 0, true},
+		{"200y200y", 0, true},
+		{"292y6mo", 0, true},
 	}
 
 	for _, tt := range tests {

internal/vaultik/info.go

@@ -167,10 +167,6 @@ const (
 	// metadataKeyParts is the minimum "/"-separated segment count of a
 	// metadata object key (metadata/<snapshot-id>/<filename>).
 	metadataKeyParts = 3
-
-	// blobKeyParts is the minimum "/"-separated segment count of a blob
-	// object key (blobs/<aa>/<bb>/<hash>).
-	blobKeyParts = 4
 )
 
 // SnapshotMetadataInfo contains information about a single snapshot's metadata
@@ -454,23 +450,16 @@ func (v *Vaultik) scanRemoteBlobStorage(
 		v.stdoutf("Scanning blobs...\n")
 	}
 
-	blobCh := v.Storage.ListStream(v.ctx, "blobs/")
+	// Use prune's listing, so a file under blobs/ that prune would never
-	allBlobs := make(map[string]int64)
+	// delete is not counted as a blob, and so not as an orphaned one.
+	allBlobs, err := v.listAllRemoteBlobs()
+	if err != nil {
+		return err
+	}
 
-	for obj := range blobCh {
+	for _, size := range allBlobs {
-		if obj.Err != nil {
-			return fmt.Errorf("listing blobs: %w", obj.Err)
-		}
-
-		parts := strings.Split(obj.Key, "/")
-		if len(parts) < blobKeyParts {
-			continue
-		}
-
-		hash := parts[3]
-		allBlobs[hash] = obj.Size
 		result.TotalBlobCount++
-		result.TotalBlobSize += obj.Size
+		result.TotalBlobSize += size
 	}
 
 	// A blob named only by a manifest that could not be read, or by one

internal/vaultik/integration_test.go

@@ -155,6 +155,12 @@ func (m *MockStorer) ListStream(
 	return ch
 }
 
+// DeletePartialUploads has nothing to remove: Put stores each object
+// under its key at once.
+func (m *MockStorer) DeletePartialUploads(_ context.Context, _ string) error {
+	return nil
+}
+
 func (m *MockStorer) Info() storage.Info {
 	return storage.Info{
 		Type:     "mock",

internal/vaultik/nuke_remote_test.go

@@ -0,0 +1,64 @@
+package vaultik_test
+
+import (
+	"context"
+	"io/fs"
+	"os"
+	"path/filepath"
+	"testing"
+
+	"github.com/stretchr/testify/assert"
+	"github.com/stretchr/testify/require"
+	"sneak.berlin/go/vaultik/internal/log"
+	"sneak.berlin/go/vaultik/internal/snapshot"
+)
+
+// TestNukeRemoteLeavesNoFiles checks that remote nuke leaves no file
+// under a file:// destination, including the `.partial` files uploads
+// killed part-way leave next to a snapshot's metadata and next to where a
+// blob would have been.
+func TestNukeRemoteLeavesNoFiles(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	ctx := context.Background()
+	storeDir := filepath.Join(t.TempDir(), "store")
+	v, repos, _ := backUpToFileDestination(ctx, t, storeDir)
+
+	snapshots, err := repos.Snapshots.ListRecent(ctx, listRecentTestLimit)
+	require.NoError(t, err)
+	require.Len(t, snapshots, 1)
+
+	snapshotKey := snapshot.RemoteSnapshotKey(snapshots[0].ID.String())
+	hash := testBlobHashA
+	leftovers := []string{
+		filepath.Join(storeDir, "metadata", snapshotKey,
+			"db.zst.age-123456.partial"),
+		filepath.Join(storeDir, "blobs", hash[:2], hash[2:4],
+			hash+"-123456.partial"),
+	}
+
+	for _, leftover := range leftovers {
+		require.NoError(t, os.MkdirAll(filepath.Dir(leftover), 0o750))
+		require.NoError(t, os.WriteFile(leftover, []byte("half an upload"), 0o600))
+	}
+
+	require.NoError(t, v.NukeRemote(true))
+
+	var files []string
+
+	err = filepath.WalkDir(storeDir,
+		func(path string, entry fs.DirEntry, err error) error {
+			if err != nil {
+				return err
+			}
+
+			if !entry.IsDir() {
+				files = append(files, path)
+			}
+
+			return nil
+		})
+	require.NoError(t, err)
+	assert.Empty(t, files)
+}

internal/vaultik/prune.go

@@ -23,9 +23,14 @@ var errNukeRequiresForce = errors.New(
 // metadata.
 const metadataDirName = "metadata"
 
+// blobKeyParts is the "/"-separated segment count of a blob object key
+// (blobs/<aa>/<bb>/<hash>).
+const blobKeyParts = 4
+
 // NukeRemote deletes every snapshot's metadata and every blob from remote
-// storage. After this returns successfully the bucket prefix is empty and
+// storage, along with any object an upload cut off part-way left under a
-// the next backup starts from scratch.
+// temporary `.partial` name. After this returns successfully the bucket
+// prefix is empty and the next backup starts from scratch.
 //
 // Refuses to run unless force is true. The caller is responsible for
 // confirming with the user.
@@ -48,6 +53,15 @@ func (v *Vaultik) NukeRemote(force bool) error {
 		return fmt.Errorf("pruning blobs: %w", err)
 	}
 
+	// The file and rclone listings skip `.partial` objects, so the two
+	// steps above never delete them.
+	for _, prefix := range []string{"metadata/", "blobs/"} {
+		err = v.Storage.DeletePartialUploads(v.ctx, prefix)
+		if err != nil {
+			return fmt.Errorf("deleting partial uploads: %w", err)
+		}
+	}
+
 	v.UI.Completef("Backup destination store is now empty.")
 
 	return nil

internal/vaultik/purge_per_name_test.go

@@ -267,6 +267,29 @@ func TestPurgeOlderThan_WithNameFilter(t *testing.T) {
 	assert.Contains(t, remaining, snapHomeT0)
 }
 
+func TestPurgeOlderThan_TooLargeDeletesNothing(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	snapshotIDs := []string{snapHomeT0, snapHomeT1}
+
+	v := setupPurgeTest(t, snapHostname, snapshotIDs)
+
+	err := v.PurgeSnapshotsWithOptions(&vaultik.SnapshotPurgeOptions{
+		OlderThan: "1000y",
+		Force:     true,
+	})
+	require.Error(t, err)
+
+	err = v.PurgeSnapshotsWithOptions(&vaultik.SnapshotPurgeOptions{
+		OlderThan: "292y",
+		Force:     true,
+	})
+	require.NoError(t, err)
+
+	assert.ElementsMatch(t, snapshotIDs, listRemainingSnapshots(t, v))
+}
+
 func TestPurgeKeepLatest_ThreeNames(t *testing.T) {
 	log.Initialize(log.Config{})
 	t.Parallel()

internal/vaultik/remote_info_test.go

@@ -185,6 +185,39 @@ func TestRemoteInfo_SkipsNonConformingMetadataName(t *testing.T) {
 	assert.NotContains(t, doc, "unreadable_manifests")
 }
 
+// TestRemoteInfo_DoesNotCountNonBlobFileUnderBlobs checks that a file
+// under blobs/ whose name is not a blob hash is not counted as a blob.
+// prune never deletes such a file, so counting it as an orphaned blob
+// would advise a prune that removes nothing.
+func TestRemoteInfo_DoesNotCountNonBlobFileUnderBlobs(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	env := newListEnv(t)
+	env.addRemote(t, listRemoteID, time.Date(2026, 3, 2, 0, 0, 0, 0, time.UTC))
+	addBlob(t, env.store.testStorer, testBlobHashA)
+	require.NoError(t, env.store.Put(context.Background(),
+		"blobs/"+testBlobHashA[:2]+"/"+testBlobHashA[2:4]+"/.DS_Store",
+		bytes.NewReader([]byte("junk"))))
+
+	require.NoError(t, env.v.RemoteInfo(false))
+
+	text := env.stdout.String()
+	assert.Contains(t, text, "Total blobs on remote:      1 (")
+	assert.Contains(t, text, "Orphaned (unreferenced):    0 (")
+	assert.NotContains(t, text, "vaultik prune")
+
+	env.stdout.Reset()
+	require.NoError(t, env.v.RemoteInfo(true))
+
+	var doc map[string]any
+
+	require.NoError(t, json.Unmarshal(env.stdout.Bytes(), &doc))
+	assert.InDelta(t, 1, doc["total_blob_count"], 0)
+	assert.InDelta(t, 0, doc["orphaned_blob_count"], 0)
+	assert.InDelta(t, 0, doc["orphaned_blob_size"], 0)
+}
+
 // TestRemoteInfo_DirectoryWithoutManifestLeavesOrphansKnown checks that
 // a directory under metadata/ holding no manifest.json.zst, such as one
 // left by a backup interrupted before its manifest upload, leaves the

internal/vaultik/remove_snapshot_test.go

@@ -3,17 +3,21 @@ package vaultik_test
 import (
 	"bytes"
 	"context"
+	"database/sql"
 	"io"
 	"strings"
 	"sync"
 	"testing"
+	"time"
 
 	"github.com/klauspost/compress/zstd"
 	"github.com/stretchr/testify/assert"
 	"github.com/stretchr/testify/require"
+	"sneak.berlin/go/vaultik/internal/database"
 	"sneak.berlin/go/vaultik/internal/log"
 	"sneak.berlin/go/vaultik/internal/snapshot"
 	"sneak.berlin/go/vaultik/internal/storage"
+	"sneak.berlin/go/vaultik/internal/types"
 	"sneak.berlin/go/vaultik/internal/vaultik"
 )
 
@@ -125,6 +129,12 @@ func (s *testStorer) ListStream(
 	return ch
 }
 
+// DeletePartialUploads has nothing to remove: Put stores each object
+// under its key at once.
+func (s *testStorer) DeletePartialUploads(_ context.Context, _ string) error {
+	return nil
+}
+
 func (s *testStorer) Info() storage.Info {
 	return storage.Info{
 		Type:     testLabel,
@@ -208,6 +218,37 @@ func addBlob(t *testing.T, store *testStorer, hash string) {
 	require.NoError(t, err)
 }
 
+// newLocalIndex returns an in-memory local index holding a completed
+// snapshot row for each of ids.
+func newLocalIndex(t *testing.T, ids ...string) *database.Repositories {
+	t.Helper()
+
+	ctx := context.Background()
+
+	db, err := database.New(ctx, ":memory:")
+	require.NoError(t, err)
+	t.Cleanup(func() { _ = db.Close() })
+
+	repos := database.NewRepositories(db)
+
+	for _, id := range ids {
+		completedAt := time.Now().UTC()
+		snap := &database.Snapshot{
+			ID:          types.SnapshotID(id),
+			Hostname:    snapHostname,
+			StartedAt:   completedAt,
+			CompletedAt: &completedAt,
+		}
+
+		err = repos.WithTx(ctx, func(ctx context.Context, tx *sql.Tx) error {
+			return repos.Snapshots.Create(ctx, tx, snap)
+		})
+		require.NoError(t, err)
+	}
+
+	return repos
+}
+
 // ============================================================================
 // Unit Tests for RemoveSnapshot
 // ============================================================================
@@ -227,6 +268,7 @@ func TestRemoveSnapshot_LocalOnly_PreservesRemote(t *testing.T) {
 	addBlob(t, store, blobA)
 
 	tv := vaultik.NewForTesting(store)
+	tv.Repositories = newLocalIndex(t, "snapshot-001")
 
 	opts := &vaultik.RemoveOptions{Force: true, LocalOnly: true}
 	result, err := tv.RemoveSnapshot("snapshot-001", opts)
@@ -262,6 +304,7 @@ func TestRemoveSnapshot_DefaultRemovesMetadataNotBlobs(t *testing.T) {
 	addBlob(t, store, blobShared)
 
 	tv := vaultik.NewForTesting(store)
+	tv.Repositories = newLocalIndex(t, "snapshot-001", "snapshot-002")
 
 	opts := &vaultik.RemoveOptions{Force: true}
 	result, err := tv.RemoveSnapshot("snapshot-001", opts)
@@ -310,6 +353,84 @@ func TestRemoveSnapshot_DryRun(t *testing.T) {
 	assert.Contains(t, tv.Stdout.String(), "[Dry run - no changes made]")
 }
 
+// TestRemoveSnapshot_UnknownIDIsError checks that an ID naming no
+// snapshot in the local index or on the destination store is an error
+// under every option, and that nothing is reported as removed.
+func TestRemoveSnapshot_UnknownIDIsError(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	for name, opts := range map[string]vaultik.RemoveOptions{
+		"force":      {Force: true},
+		"json":       {JSON: true},
+		"dry-run":    {Force: true, DryRun: true},
+		"local-only": {Force: true, LocalOnly: true},
+	} {
+		t.Run(name, func(t *testing.T) {
+			t.Parallel()
+
+			store := newTestStorer()
+			addManifest(t, store, "snapshot-001", nil)
+
+			tv := vaultik.NewForTesting(store)
+			tv.Repositories = newLocalIndex(t, "snapshot-001")
+
+			result, err := tv.RemoveSnapshot("snapshot-999", &opts)
+
+			require.ErrorContains(t, err, "snapshot not found")
+			assert.False(t, result.RemoteRemoved)
+			assert.Empty(t, tv.Stdout.String())
+			assert.True(t, store.hasKey(remoteKeyPath("snapshot-001")))
+		})
+	}
+}
+
+// TestRemoveSnapshot_NoMetadataOnDestination checks that removing a
+// snapshot whose metadata is not on the destination store does not
+// report metadata removed from it.
+func TestRemoveSnapshot_NoMetadataOnDestination(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	tv := vaultik.NewForTesting(newTestStorer())
+	tv.Repositories = newLocalIndex(t, "snapshot-001")
+
+	result, err := tv.RemoveSnapshot("snapshot-001",
+		&vaultik.RemoveOptions{Force: true})
+
+	require.NoError(t, err)
+	assert.False(t, result.RemoteRemoved)
+
+	out := tv.Stdout.String()
+	assert.Contains(t, out, "Removed snapshot 'snapshot-001' from local database")
+	assert.NotContains(t, out, "Removed snapshot metadata from remote storage")
+}
+
+// TestRemoveSnapshot_NotInLocalIndex checks that removing a snapshot
+// only the destination store holds removes its metadata there without
+// reporting a removal from the local database.
+func TestRemoveSnapshot_NotInLocalIndex(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	store := newTestStorer()
+	addManifest(t, store, "snapshot-001", nil)
+
+	tv := vaultik.NewForTesting(store)
+	tv.Repositories = newLocalIndex(t)
+
+	result, err := tv.RemoveSnapshot("snapshot-001",
+		&vaultik.RemoveOptions{Force: true})
+
+	require.NoError(t, err)
+	assert.True(t, result.RemoteRemoved)
+	assert.False(t, store.hasKey(remoteKeyPath("snapshot-001")))
+
+	out := tv.Stdout.String()
+	assert.NotContains(t, out, "from local database")
+	assert.Contains(t, out, "Removed snapshot metadata from remote storage")
+}
+
 func TestRemoveAllSnapshots_RequiresForce(t *testing.T) {
 	log.Initialize(log.Config{})
 	t.Parallel()

internal/vaultik/snapshot.go

@@ -23,6 +23,7 @@ var (
 	errNoSnapshotsInConfig  = errors.New("no snapshots configured")
 	errSnapshotVerifyFailed = errors.New("verification failed")
 	errRemoveAllNeedsForce  = errors.New("--all requires --force")
+	errSnapshotNotFound     = errors.New("snapshot not found")
 	errInvalidTableName     = errors.New("invalid table name")
 	errNoAgeRecipients      = errors.New(
 		"creating a snapshot needs at least one public key in " +
@@ -643,7 +644,7 @@ func (v *Vaultik) confirmAndExecutePurge(
 				"snapshot_id", snapshotID, "error", err)
 		}
 
-		err = v.deleteRemoteSnapshotByKey(snapshot.RemoteSnapshotKey(snapshotID))
+		_, err = v.deleteRemoteSnapshotByKey(snapshot.RemoteSnapshotKey(snapshotID))
 		if err != nil {
 			return fmt.Errorf("deleting snapshot %s from remote: %w", snapshotID, err)
 		}
@@ -1153,6 +1154,11 @@ func (v *Vaultik) RemoveSnapshot(
 		return result, err
 	}
 
+	inLocalIndex, err := v.findSnapshotToRemove(snapshotID, opts)
+	if err != nil {
+		return result, err
+	}
+
 	if opts.DryRun {
 		return v.removeSnapshotDryRun(result, snapshotID, opts)
 	}
@@ -1161,11 +1167,13 @@ func (v *Vaultik) RemoveSnapshot(
 		return result, nil
 	}
 
-	log.Info("Removing snapshot from local database", "snapshot_id", snapshotID)
+	if inLocalIndex {
+		log.Info("Removing snapshot from local database", "snapshot_id", snapshotID)
 
-	err = v.deleteSnapshotFromLocalDB(snapshotID)
+		err = v.deleteSnapshotFromLocalDB(snapshotID)
-	if err != nil {
+		if err != nil {
-		return result, fmt.Errorf("removing from local database: %w", err)
+			return result, fmt.Errorf("removing from local database: %w", err)
+		}
 	}
 
 	if !opts.LocalOnly {
@@ -1184,9 +1192,11 @@ func (v *Vaultik) RemoveSnapshot(
 		return result, v.outputRemoveJSON(result)
 	}
 
-	v.stdoutf("Removed snapshot '%s' from local database\n", snapshotID)
+	if inLocalIndex {
+		v.stdoutf("Removed snapshot '%s' from local database\n", snapshotID)
+	}
 
-	if !opts.LocalOnly && result.RemoteRemoved {
+	if result.RemoteRemoved {
 		v.printlnStdout("Removed snapshot metadata from remote storage")
 		v.stdoutf("\nNote: The removed snapshot's blobs remain on the remote. "+
 			"Run '%s' to delete any blobs no longer referenced by any "+
@@ -1196,6 +1206,45 @@ func (v *Vaultik) RemoveSnapshot(
 	return result, nil
 }
 
+// findSnapshotToRemove reports whether the local index has a row for
+// snapshotID, and returns errSnapshotNotFound when there is nothing to
+// remove: no row and, unless LocalOnly is set, no metadata on the
+// destination store either. The destination store is consulted only
+// when the local index has no row, so a snapshot in the local index can
+// still be removed from it while the destination store is unreachable.
+func (v *Vaultik) findSnapshotToRemove(
+	snapshotID string, opts *RemoveOptions,
+) (bool, error) {
+	if v.Repositories != nil {
+		snap, err := v.Repositories.Snapshots.GetByID(v.ctx, snapshotID)
+		if err != nil {
+			return false, fmt.Errorf("looking up snapshot in local index: %w", err)
+		}
+
+		if snap != nil {
+			return true, nil
+		}
+	}
+
+	if opts.LocalOnly {
+		return false, fmt.Errorf("%w in the local index: %s",
+			errSnapshotNotFound, snapshotID)
+	}
+
+	objects, err := v.remoteSnapshotObjects(snapshot.RemoteSnapshotKey(snapshotID))
+	if err != nil {
+		return false, fmt.Errorf("looking up snapshot on destination store: %w", err)
+	}
+
+	if len(objects) == 0 {
+		return false, fmt.Errorf(
+			"%w in the local index or on the destination store: %s",
+			errSnapshotNotFound, snapshotID)
+	}
+
+	return false, nil
+}
+
 // removeSnapshotDryRun reports what RemoveSnapshot would do without
 // making changes.
 func (v *Vaultik) removeSnapshotDryRun(
@@ -1255,14 +1304,14 @@ func (v *Vaultik) confirmRemoveSnapshot(snapshotID string, opts *RemoveOptions)
 // didn't finish and to run `vaultik snapshot remove` for the snapshot
 // again once the destination store is reachable (`vaultik prune` never
 // removes snapshot metadata). Returns true when the remote removal
-// succeeded.
+// succeeded and deleted something.
 func (v *Vaultik) removeSnapshotRemote(snapshotID string, opts *RemoveOptions) bool {
 	log.Info("Removing snapshot metadata from remote storage",
 		"snapshot_id", snapshotID)
 
 	remoteKey := snapshot.RemoteSnapshotKey(snapshotID)
 
-	err := v.deleteRemoteSnapshotByKey(remoteKey)
+	deleted, err := v.deleteRemoteSnapshotByKey(remoteKey)
 	if err != nil {
 		log.Warn("Could not remove snapshot metadata from remote storage; "+
 			"run '"+snapshotRemoveCommandHint+"' with the snapshot's ID "+
@@ -1280,7 +1329,7 @@ func (v *Vaultik) removeSnapshotRemote(snapshotID string, opts *RemoveOptions) b
 		return false
 	}
 
-	return true
+	return deleted > 0
 }
 
 // RemoveAllSnapshots removes every snapshot known to the local
@@ -1572,7 +1621,7 @@ func (v *Vaultik) removeAllLocalSnapshots(
 		}
 
 		if !opts.LocalOnly {
-			err = v.deleteRemoteSnapshotByKey(
+			_, err = v.deleteRemoteSnapshotByKey(
 				snapshot.RemoteSnapshotKey(snapshotID))
 			if err != nil {
 				log.Warn("Failed to remove snapshot metadata from remote",
@@ -1598,7 +1647,7 @@ func (v *Vaultik) removeAllOrphanRemotes(
 	for _, key := range orphanRemoteKeys {
 		log.Info("Removing orphan remote snapshot", "remote_key", key)
 
-		err := v.deleteRemoteSnapshotByKey(key)
+		_, err := v.deleteRemoteSnapshotByKey(key)
 		if err != nil {
 			log.Warn("Failed to remove orphan from remote",
 				"remote_key", key, "error", err)
@@ -1645,34 +1694,44 @@ func (v *Vaultik) deleteSnapshotFromLocalDB(snapshotID string) error {
 }
 
 // deleteRemoteSnapshotByKey removes everything under
-// metadata/<remoteKey>/ on the destination store. The argument is a
+// metadata/<remoteKey>/ on the destination store and returns how many
-// remote key (double-SHA256 derivation), not a human snapshot ID;
+// objects it deleted. The argument is a remote key (double-SHA256
-// callers that have a human ID must hash via snapshot.RemoteSnapshotKey
+// derivation), not a human snapshot ID; callers that have a human ID
-// first.
+// must hash via snapshot.RemoteSnapshotKey first.
-func (v *Vaultik) deleteRemoteSnapshotByKey(remoteKey string) error {
+func (v *Vaultik) deleteRemoteSnapshotByKey(remoteKey string) (int, error) {
-	prefix := fmt.Sprintf("metadata/%s/", remoteKey)
+	objectsToDelete, err := v.remoteSnapshotObjects(remoteKey)
-	objectCh := v.Storage.ListStream(v.ctx, prefix)
+	if err != nil {
-
+		return 0, err
-	var objectsToDelete []string
-
-	for object := range objectCh {
-		if object.Err != nil {
-			return fmt.Errorf("listing objects: %w", object.Err)
-		}
-
-		objectsToDelete = append(objectsToDelete, object.Key)
 	}
 
-	for _, key := range objectsToDelete {
+	for i, key := range objectsToDelete {
-		err := v.Storage.Delete(v.ctx, key)
+		err = v.Storage.Delete(v.ctx, key)
 		if err != nil {
-			return fmt.Errorf("removing %s: %w", key, err)
+			return i, fmt.Errorf("removing %s: %w", key, err)
 		}
 
 		log.Debug("Deleted remote object", "key", key)
 	}
 
-	return nil
+	return len(objectsToDelete), nil
+}
+
+// remoteSnapshotObjects lists the keys of every object under
+// metadata/<remoteKey>/ on the destination store.
+func (v *Vaultik) remoteSnapshotObjects(remoteKey string) ([]string, error) {
+	prefix := fmt.Sprintf("metadata/%s/", remoteKey)
+
+	var keys []string
+
+	for object := range v.Storage.ListStream(v.ctx, prefix) {
+		if object.Err != nil {
+			return nil, fmt.Errorf("listing objects: %w", object.Err)
+		}
+
+		keys = append(keys, object.Key)
+	}
+
+	return keys, nil
 }
 
 // outputRemoveJSON outputs the removal result as JSON

internal/vaultik/storage_bind.go

@@ -9,7 +9,7 @@ import (
 )
 
 // errStorageBindingMismatch is returned when the local index database is
-// bound to a different destination than the configured storage_url.
+// bound to a different destination than the configured one.
 var errStorageBindingMismatch = errors.New(
 	"local index is bound to a different backup destination")
 
@@ -24,8 +24,9 @@ var errStorageBindingMismatch = errors.New(
 //
 // Behaviour:
 //   - On first use (empty stored value), record the configured
-//     storage_url and log the binding.
+//     destination (storage_url, or the s3.* endpoint, bucket and
-//   - When the stored value matches the configured storage_url, do
+//     prefix) and log the binding.
+//   - When the stored value matches the configured destination, do
 //     nothing and return nil.
 //   - When the two differ, refuse with an error that tells the user
 //     how to recover (revert the config, or run `vaultik database
@@ -46,12 +47,10 @@ func (v *Vaultik) EnsureStorageBinding() error {
 
 	configured := v.Config.StorageURL
 	if configured == "" {
-		// Some legacy configs still use the split s3.* keys instead of
+		// The s3.* form: bind on its endpoint, bucket and prefix,
-		// storage_url. Falling back to a synthetic URL for those would
+		// written the way storage_url would name the same destination.
-		// hide the fact that the binding is loose. Instead, treat
+		s3 := v.Config.S3
-		// unset as "nothing to bind against" — the check is
+		configured = "s3://" + s3.Bucket + "/" + s3.Prefix + "?endpoint=" + s3.Endpoint
-		// necessarily best-effort for those configs.
-		return nil
 	}
 
 	stored, err := v.Repositories.LocalMeta.Get(v.ctx, database.LocalMetaKeyStorageURL)
@@ -96,7 +95,8 @@ func buildBindingMismatchMessage(stored, configured string) string {
 		"future snapshots referencing blobs that don't exist at the new destination.\n" +
 		"\n" +
 		"To proceed, either:\n" +
-		"  - revert storage_url in your config to the bound destination, or\n" +
+		"  - revert storage_url (or the s3.* endpoint, bucket and prefix) in your\n" +
+		"    config to the bound destination, or\n" +
 		"  - run 'vaultik database delete' to discard the local index and rebuild it\n" +
 		"    from a fresh full backup against the new destination"
 }

internal/vaultik/storage_bind_test.go

@@ -76,3 +76,51 @@ func TestEnsureStorageBinding_MismatchRefuses(t *testing.T) {
 	assert.Contains(t, err.Error(), "file:///mnt/backups/new")
 	assert.Contains(t, err.Error(), "vaultik database delete")
 }
+
+// A config with no storage_url names its destination with s3.endpoint,
+// s3.bucket and s3.prefix; a change to any of them must be refused just
+// as a changed storage_url is.
+func TestEnsureStorageBinding_S3FieldsChangeRefuses(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	bound := config.S3Config{
+		Endpoint: "https://s3.example.com",
+		Bucket:   "bucket-a",
+		Prefix:   "backups",
+	}
+
+	tests := []struct {
+		name    string
+		changed config.S3Config
+	}{
+		{"bucket", config.S3Config{
+			Endpoint: bound.Endpoint, Bucket: "bucket-b", Prefix: bound.Prefix,
+		}},
+		{"prefix", config.S3Config{
+			Endpoint: bound.Endpoint, Bucket: bound.Bucket, Prefix: "other",
+		}},
+		{"endpoint", config.S3Config{
+			Endpoint: "https://s3.other.com", Bucket: bound.Bucket, Prefix: bound.Prefix,
+		}},
+	}
+
+	for _, tt := range tests {
+		t.Run(tt.name, func(t *testing.T) {
+			t.Parallel()
+
+			tv, _ := buildBindTestVaultik(t, "")
+
+			tv.Config.S3 = bound
+			require.NoError(t, tv.EnsureStorageBinding(), "first use binds")
+			require.NoError(t, tv.EnsureStorageBinding(), "same destination passes")
+
+			tv.Config.S3 = tt.changed
+			err := tv.EnsureStorageBinding()
+			require.Error(t, err)
+			assert.Contains(t, err.Error(),
+				"local index is bound to a different backup destination")
+			assert.Contains(t, err.Error(), "vaultik database delete")
+		})
+	}
+}

internal/vaultik/symlinked_destination_test.go

@@ -0,0 +1,121 @@
+package vaultik_test
+
+import (
+	"context"
+	"io/fs"
+	"os"
+	"path/filepath"
+	"testing"
+
+	"github.com/stretchr/testify/assert"
+	"github.com/stretchr/testify/require"
+	"sneak.berlin/go/vaultik/internal/log"
+	"sneak.berlin/go/vaultik/internal/vaultik"
+)
+
+// TestPruneDeletesNothingThroughSymlinkedDirectory checks that prune keeps
+// every blob and the local snapshot record when the metadata/ or blobs/
+// directory of a file:// destination is a symlink to a directory elsewhere
+// (https://git.eeqj.de/sneak/vaultik/issues/296). A backup writes through
+// such a link, so prune has to list through it too.
+func TestPruneDeletesNothingThroughSymlinkedDirectory(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	for _, dir := range []string{"metadata", "blobs"} {
+		t.Run(dir, func(t *testing.T) {
+			t.Parallel()
+
+			ctx := context.Background()
+			storeDir := filepath.Join(t.TempDir(), "store")
+			v, repos, _ := backUpToFileDestination(ctx, t, storeDir)
+			blobFiles := blobFilesIn(t, storeDir)
+			moveBehindSymlink(t, storeDir, dir)
+
+			require.NoError(t, v.Prune(&vaultik.PruneOptions{Force: true}))
+
+			// When blobs/ is the link, these paths run through it.
+			for _, blobFile := range blobFiles {
+				assert.FileExists(t, blobFile, "prune must delete no blob")
+			}
+
+			snapshots, err := repos.Snapshots.ListRecent(ctx, listRecentTestLimit)
+			require.NoError(t, err)
+			assert.Len(t, snapshots, 1, "prune must delete no local snapshot record")
+		})
+	}
+}
+
+// TestPruneFailsOnSymlinkedDirectoryWithMissingTarget checks that prune
+// fails, deleting no blob and keeping the local snapshot record, when the
+// metadata/ or blobs/ directory of a file:// destination is a symlink
+// whose target is missing, as a link to a volume that is not mounted is.
+func TestPruneFailsOnSymlinkedDirectoryWithMissingTarget(t *testing.T) {
+	log.Initialize(log.Config{})
+	t.Parallel()
+
+	for _, dir := range []string{"metadata", "blobs"} {
+		t.Run(dir, func(t *testing.T) {
+			t.Parallel()
+
+			ctx := context.Background()
+			storeDir := filepath.Join(t.TempDir(), "store")
+			v, repos, _ := backUpToFileDestination(ctx, t, storeDir)
+			blobFiles := blobFilesIn(t, storeDir)
+			targetPath := moveBehindSymlink(t, storeDir, dir)
+
+			// Unmount the volume the link points to, and mount it again
+			// once prune has run.
+			unmountedPath := targetPath + "-unmounted"
+			require.NoError(t, os.Rename(targetPath, unmountedPath))
+
+			err := v.Prune(&vaultik.PruneOptions{Force: true})
+			require.ErrorIs(t, err, fs.ErrNotExist)
+
+			require.NoError(t, os.Rename(unmountedPath, targetPath))
+
+			// When blobs/ is the link, these paths run through it.
+			for _, blobFile := range blobFiles {
+				assert.FileExists(t, blobFile, "prune must delete no blob")
+			}
+
+			snapshots, err := repos.Snapshots.ListRecent(ctx, listRecentTestLimit)
+			require.NoError(t, err)
+			assert.Len(t, snapshots, 1, "prune must delete no local snapshot record")
+		})
+	}
+}
+
+// blobFilesIn returns the paths of the blob files under storeDir/blobs, and
+// fails the test when there are none.
+func blobFilesIn(t *testing.T, storeDir string) []string {
+	t.Helper()
+
+	var blobFiles []string
+
+	err := filepath.WalkDir(filepath.Join(storeDir, "blobs"),
+		func(path string, entry fs.DirEntry, err error) error {
+			if err == nil && !entry.IsDir() {
+				blobFiles = append(blobFiles, path)
+			}
+
+			return err
+		})
+	require.NoError(t, err)
+	require.NotEmpty(t, blobFiles)
+
+	return blobFiles
+}
+
+// moveBehindSymlink moves storeDir/dir to a directory elsewhere, puts a
+// symlink to it in its place, and returns where it went.
+func moveBehindSymlink(t *testing.T, storeDir, dir string) string {
+	t.Helper()
+
+	linkPath := filepath.Join(storeDir, dir)
+	targetPath := filepath.Join(t.TempDir(), dir)
+	require.NoError(t, os.Rename(linkPath, targetPath))
+	require.NoError(t, os.Symlink(targetPath, linkPath))
+
+	return targetPath
+}