Format Markdown with prettier and move documents out of the root (closes #411)
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REPO_POLICIES.md names prettier as the Markdown formatter and keeps documents out of the root. script/fmt and script/fmt-check now run prettier over all Markdown (4-space indents, proseWrap always) besides gofmt, with node and yarn installed by script/bootstrap as in sneak/prompts. All Markdown is reformatted with no text change. ARCHITECTURE.md and TODO.md move to docs/, config.example.yml to configs/, and every reference follows. Model: opus-5-5
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# Vaultik Architecture
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This document describes the internal architecture of Vaultik, focusing on the
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data model, type instantiation, and the relationships between core modules.
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## Overview
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Vaultik is a backup system that uses content-defined chunking for deduplication
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and packs chunks into large, compressed, encrypted blobs for efficient cloud
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storage. The system is built around dependency injection using
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[uber-go/fx](https://github.com/uber-go/fx).
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## Data Flow
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```
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Source Files
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│
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▼
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┌─────────────────┐
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│ Scanner │ Walks directories, detects changed files
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└────────┬────────┘
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│
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▼
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┌─────────────────┐
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│ Chunker │ Splits files into variable-size chunks (FastCDC)
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└────────┬────────┘
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│
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▼
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┌─────────────────┐
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│ Packer │ Accumulates chunks, compresses (zstd), encrypts (age)
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└────────┬────────┘
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│
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▼
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┌─────────────────┐
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│ S3 Client │ Uploads blobs to remote storage
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└─────────────────┘
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```
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## Data Model
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### Core Entities
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The database tracks five primary entities and their relationships:
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```
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┌──────────────┐ ┌──────────────┐ ┌──────────────┐
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│ Snapshot │────▶│ File │────▶│ Chunk │
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└──────────────┘ └──────────────┘ └──────────────┘
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│ │
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│ │
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▼ ▼
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┌──────────────┐ ┌──────────────┐
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│ Blob │◀─────────────────────────│ BlobChunk │
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└──────────────┘ └──────────────┘
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```
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### Entity Descriptions
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#### File (`database.File`)
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Represents a file, directory, or symlink in the backup system. Stores metadata
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needed for restoration:
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- Path, mtime
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- Size, mode, ownership (uid, gid)
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- Symlink target (if applicable)
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It also stores `source_path`, the source directory the scan found it under, made
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absolute and with symlinks resolved. Restore does not read it.
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#### Chunk (`database.Chunk`)
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A content-addressed unit of data. Files are split into variable-size chunks
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using the FastCDC algorithm:
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- `ChunkHash`: SHA256 hash of chunk content (primary key)
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- `Size`: Chunk size in bytes
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||||
|
||||
Chunk sizes vary between `avgChunkSize/4` and `avgChunkSize*4` (2.5MB-40MB for
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the 10MB default average).
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||||
|
||||
#### FileChunk (`database.FileChunk`)
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||||
Maps files to their constituent chunks:
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- `FileID`: Reference to the file
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- `Idx`: Position of this chunk within the file (0-indexed)
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- `ChunkHash`: Reference to the chunk
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|
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#### Blob (`database.Blob`)
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The final storage unit uploaded to S3. Contains many compressed and encrypted
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chunks:
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- `ID`: UUID assigned at creation
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- `Hash`: `hex(SHA256(SHA256(uncompressed blob contents)))`, computed before
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compression and encryption (see
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[docs/REPOSTRUCTURE.md](REPOSTRUCTURE.md#blobs-directory-blobs))
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- `UncompressedSize`: Total raw chunk data before compression
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- `CompressedSize`: Size after zstd compression and age encryption
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||||
- `CreatedTS`, `FinishedTS`, `UploadedTS`: Lifecycle timestamps
|
||||
|
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Blob creation process:
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|
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1. Chunks are accumulated (up to MaxBlobSize, typically 10GB)
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2. As each chunk is added, its uncompressed bytes are fed to a running SHA-256
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3. Concurrently, the same bytes are compressed with zstd, then encrypted with
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age (recipients configured in config), and written to a temporary file
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4. On finalize, the blob's name is the double SHA-256 of the uncompressed
|
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contents — `hex(SHA256(SHA256(...)))` — not a hash of the compressed,
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encrypted bytes
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5. The finished file is uploaded to `blobs/{hash[0:2]}/{hash[2:4]}/{hash}` and
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then deleted
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A backup needs free temporary space, because each blob is written whole to a
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temporary file before it is uploaded (up to about `blob_size_limit`; an rclone
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destination that cannot stream uploads needs about twice that) and the metadata
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export writes copies of the local index. Temporary files go to `$TMPDIR`
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||||
(default `/tmp`); with `TMPDIR` unset, SQLite writes one of those copies to
|
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`/var/tmp`.
|
||||
|
||||
#### BlobChunk (`database.BlobChunk`)
|
||||
|
||||
Maps chunks to their position within blobs:
|
||||
|
||||
- `BlobID`: Reference to the blob
|
||||
- `ChunkHash`: Reference to the chunk
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- `Offset`: Byte offset within the uncompressed blob
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- `Length`: Chunk size
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|
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#### Snapshot (`database.Snapshot`)
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Represents a point-in-time backup:
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- `ID`: Format is `{hostname}_{snapshot-name}_{RFC3339}` (e.g.
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`server1_home_2025-06-01T12:00:00Z`)
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- Tracks file count, chunk count, blob count, sizes, compression ratio
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- `CompletedAt`: Null until snapshot finishes successfully
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#### SnapshotFile / SnapshotBlob
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Join tables linking snapshots to their files and blobs.
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### Relationship Summary
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```
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Snapshot 1──────────▶ N SnapshotFile N ◀────────── 1 File
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Snapshot 1──────────▶ N SnapshotBlob N ◀────────── 1 Blob
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File 1──────────▶ N FileChunk N ◀────────── 1 Chunk
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Blob 1──────────▶ N BlobChunk N ◀────────── 1 Chunk
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```
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## Type Instantiation
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### Application Startup
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The CLI uses fx for dependency injection. Here's the instantiation order:
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```go
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// cli/app.go: NewApp()
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fx.New(
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fx.Supply(config.Path(opts.ConfigPath)), // 1. Config path
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fx.Supply(opts.LogOptions), // 2. Log options
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fx.Provide(globals.New), // 3. Globals
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fx.Provide(log.New), // 4. Logger config
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config.Module, // 5. Config
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database.Module, // 6. Database + Repositories
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||||
log.Module, // 7. Logger initialization
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storage.Module, // 8. Storage backend (S3/file/rclone)
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snapshot.Module, // 9. SnapshotManager + ScannerFactory
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fx.Provide(vaultik.New), // 10. Vaultik orchestrator
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)
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```
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### Key Type Instantiation Points
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#### 1. Config (`config.Config`)
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- **Created by**: `config.Module` via `config.LoadConfig()`
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- **When**: Application startup (fx DI)
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- **Contains**: All configuration from YAML file (S3 credentials, encryption
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keys, paths, etc.)
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#### 2. Database (`database.DB`)
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- **Created by**: `database.Module` via `database.New()`
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- **When**: Application startup (fx DI)
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- **Contains**: SQLite connection, path reference
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#### 3. Repositories (`database.Repositories`)
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- **Created by**: `database.Module` via `database.NewRepositories()`
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- **When**: Application startup (fx DI)
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- **Contains**: All repository interfaces (Files, Chunks, Blobs, Snapshots,
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etc.)
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#### 4. Vaultik (`vaultik.Vaultik`)
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- **Created by**: `vaultik.New(VaultikParams)`
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- **When**: Application startup (fx DI)
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- **Contains**: All dependencies for backup operations
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```go
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type Vaultik struct {
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Globals *globals.Globals
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Config *config.Config
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DB *database.DB
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Repositories *database.Repositories
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Storage storage.Storer
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ScannerFactory snapshot.ScannerFactory
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SnapshotManager *snapshot.SnapshotManager
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Shutdowner fx.Shutdowner
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Fs afero.Fs
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ctx context.Context
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||||
cancel context.CancelFunc
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||||
}
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||||
```
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|
||||
#### 5. SnapshotManager (`snapshot.SnapshotManager`)
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||||
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||||
- **Created by**: `snapshot.Module` via `snapshot.NewSnapshotManager()`
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- **When**: Application startup (fx DI)
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- **Responsibility**: Creates/completes snapshots, exports metadata to S3
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#### 6. Scanner (`snapshot.Scanner`)
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- **Created by**: `ScannerFactory(ScannerParams)`
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- **When**: Each `CreateSnapshot()` call
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- **Contains**: Chunker, Packer, progress reporter
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|
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```go
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// vaultik/snapshot.go: CreateSnapshot()
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scanner := v.ScannerFactory(snapshot.ScannerParams{
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EnableProgress: !opts.Cron,
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Fs: v.Fs,
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})
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```
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#### 7. Chunker (`chunker.Chunker`)
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- **Created by**: `chunker.NewChunker(avgChunkSize)`
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- **When**: Inside `snapshot.NewScanner()`
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- **Configuration**:
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- `avgChunkSize`: From config (default 10MB)
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- `minChunkSize`: avgChunkSize / 4
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- `maxChunkSize`: avgChunkSize \* 4
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||||
|
||||
#### 8. Packer (`blob.Packer`)
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||||
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||||
- **Created by**: `blob.NewPacker(PackerConfig)`
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- **When**: Inside `snapshot.NewScanner()`
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- **Configuration**:
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- `MaxBlobSize`: Maximum blob size before finalization (typically 10GB)
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- `CompressionLevel`: zstd level (1-19)
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- `Recipients`: age public keys for encryption
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```go
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// snapshot/scanner.go: NewScanner()
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packerCfg := blob.PackerConfig{
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MaxBlobSize: cfg.MaxBlobSize,
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CompressionLevel: cfg.CompressionLevel,
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Recipients: cfg.AgeRecipients,
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Repositories: cfg.Repositories,
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Fs: cfg.FS,
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}
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packer, err := blob.NewPacker(packerCfg)
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||||
```
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## Module Responsibilities
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||||
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||||
### `internal/cli`
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||||
Entry point for fx application. Combines all modules and handles signal
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interrupts.
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||||
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||||
Key functions:
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||||
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||||
- `NewApp(AppOptions)` → Creates fx.App with all modules
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||||
- `RunApp(ctx, app)` → Starts app, handles graceful shutdown
|
||||
- `RunWithApp(ctx, opts)` → Convenience wrapper
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||||
|
||||
### `internal/vaultik`
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||||
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||||
Main orchestrator containing all dependencies and command implementations.
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||||
|
||||
Key methods:
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||||
|
||||
- `New(VaultikParams)` → Constructor (fx DI)
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||||
- `CreateSnapshot(opts)` → Main backup operation
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||||
- `ListSnapshots(jsonOutput)` → List available snapshots
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||||
- `VerifySnapshot(id, deep)` → Verify snapshot integrity
|
||||
- `PurgeSnapshots(...)` → Remove old snapshots
|
||||
|
||||
### `internal/chunker`
|
||||
|
||||
Content-defined chunking using FastCDC algorithm.
|
||||
|
||||
Key types:
|
||||
|
||||
- `Chunk` → Hash, Data, Offset, Size
|
||||
- `Chunker` → avgChunkSize, minChunkSize, maxChunkSize
|
||||
|
||||
Key methods:
|
||||
|
||||
- `NewChunker(avgChunkSize)` → Constructor
|
||||
- `ChunkReaderStreaming(reader, callback)` → Stream chunks with callback
|
||||
(preferred)
|
||||
- `ChunkReader(reader)` → Return all chunks at once (memory-intensive)
|
||||
|
||||
### `internal/blob`
|
||||
|
||||
Blob packing: accumulates chunks, compresses, encrypts, tracks metadata.
|
||||
|
||||
Key types:
|
||||
|
||||
- `Packer` → Thread-safe blob accumulator
|
||||
- `ChunkRef` → Hash + Data for adding to packer
|
||||
- `FinishedBlob` → Completed blob ready for upload
|
||||
- `BlobWithReader` → FinishedBlob + io.Reader for streaming upload
|
||||
|
||||
Key methods:
|
||||
|
||||
- `NewPacker(PackerConfig)` → Constructor
|
||||
- `AddChunk(ChunkRef)` → Add chunk to current blob
|
||||
- `FinalizeBlob()` → Compress, encrypt, hash current blob
|
||||
- `Flush()` → Finalize any in-progress blob
|
||||
- `SetBlobHandler(func)` → Set callback for upload
|
||||
|
||||
### `internal/snapshot`
|
||||
|
||||
#### Scanner
|
||||
|
||||
Orchestrates the backup process for a directory.
|
||||
|
||||
Key methods:
|
||||
|
||||
- `NewScanner(ScannerConfig)` → Constructor (creates Chunker + Packer)
|
||||
- `Scan(ctx, path, snapshotID)` → Main scan operation
|
||||
|
||||
Scan phases:
|
||||
|
||||
1. **Phase 1**: Walk directory, identify files needing processing
|
||||
2. **Phase 1b**: Count as deleted the files that the previous snapshot of the
|
||||
same name lists, the walk did not find, and are gone from disk; a file that
|
||||
is excluded, or inside an excluded directory, is not counted
|
||||
3. **Phase 2**: Process files (chunk → pack → upload)
|
||||
|
||||
#### SnapshotManager
|
||||
|
||||
Manages snapshot lifecycle and metadata export.
|
||||
|
||||
Key methods:
|
||||
|
||||
- `CreateSnapshot(ctx, hostname, version, commit)` → Create snapshot record
|
||||
- `PopulateSnapshotBlobs(ctx, snapshotID)` → Record every blob the snapshot
|
||||
references
|
||||
- `ExportSnapshotMetadata(ctx, dbPath, snapshotID)` → Export to S3
|
||||
- `MarkSnapshotComplete(ctx, snapshotID)` → Record completion, only after a
|
||||
successful export
|
||||
- `CompleteSnapshot(ctx, snapshotID)` → Convenience: populate blobs, then mark
|
||||
complete (no export between)
|
||||
|
||||
### `internal/database`
|
||||
|
||||
SQLite database for local index. Single-writer mode for thread safety.
|
||||
|
||||
Key types:
|
||||
|
||||
- `DB` → Database connection wrapper
|
||||
- `Repositories` → Collection of all repository interfaces
|
||||
|
||||
Repository interfaces:
|
||||
|
||||
- `FilesRepository` → CRUD for File records
|
||||
- `ChunksRepository` → CRUD for Chunk records
|
||||
- `BlobsRepository` → CRUD for Blob records
|
||||
- `SnapshotsRepository` → CRUD for Snapshot records
|
||||
- Plus join table repositories (FileChunks, BlobChunks, etc.)
|
||||
|
||||
## Snapshot Creation Flow
|
||||
|
||||
```
|
||||
CreateSnapshot(opts)
|
||||
│
|
||||
├─► markDestination() // Check the marker (see Storage Layout in S3), then write it
|
||||
│
|
||||
├─► PruneDatabase() // Critical: avoid dedup errors
|
||||
│
|
||||
├─► SnapshotManager.CreateSnapshot() // Create DB record
|
||||
│
|
||||
├─► For each source directory:
|
||||
│ │
|
||||
│ ├─► scanner.Scan(ctx, path, snapshotID)
|
||||
│ │ │
|
||||
│ │ ├─► Phase 1: scanPhase()
|
||||
│ │ │ Walk directory
|
||||
│ │ │ Check file metadata changes
|
||||
│ │ │ Build list of files to process
|
||||
│ │ │
|
||||
│ │ ├─► Phase 1b: detectDeletedFiles()
|
||||
│ │ │
|
||||
│ │ └─► Phase 2: processPhase()
|
||||
│ │ For each file:
|
||||
│ │ chunker.ChunkReaderStreaming()
|
||||
│ │ For each chunk:
|
||||
│ │ packer.AddChunk()
|
||||
│ │ If blob full → FinalizeBlob()
|
||||
│ │ → handleBlobReady()
|
||||
│ │ → s3Client.PutObjectWithProgress()
|
||||
│ │ packer.Flush() // Final blob
|
||||
│ │
|
||||
│ └─► Accumulate statistics
|
||||
│
|
||||
├─► SnapshotManager.PopulateSnapshotBlobs() // record referenced blobs
|
||||
│
|
||||
├─► SnapshotManager.UpdateSnapshotStatsExtended()
|
||||
│
|
||||
├─► SnapshotManager.ExportSnapshotMetadata()
|
||||
│ │
|
||||
│ ├─► Copy database to temp file
|
||||
│ ├─► Clean to only current snapshot data (VACUUM)
|
||||
│ ├─► Compress binary SQLite with zstd
|
||||
│ ├─► Encrypt with age
|
||||
│ ├─► Upload db.zst.age to storage
|
||||
│ └─► Upload manifest.json.zst to storage
|
||||
│
|
||||
└─► SnapshotManager.MarkSnapshotComplete() // only after the export succeeds
|
||||
```
|
||||
|
||||
## Deduplication Strategy
|
||||
|
||||
1. **File-level**: Files and symlinks unchanged since last backup are skipped
|
||||
(metadata comparison: size, mtime, mode, uid, gid, and a symlink's target),
|
||||
unless the file lists a chunk that no uploaded blob holds; such a file is
|
||||
re-chunked
|
||||
|
||||
2. **Chunk-level**: Chunks are content-addressed by SHA256 hash. If a chunk hash
|
||||
already exists in the database, the chunk data is not re-uploaded.
|
||||
|
||||
3. **Blob-level**: Blobs contain only unique chunks. Duplicate chunks within a
|
||||
blob are skipped.
|
||||
|
||||
## Storage Layout in S3
|
||||
|
||||
```
|
||||
bucket/
|
||||
├── vaultik-destination.txt # Marker written by every backup
|
||||
│
|
||||
├── blobs/
|
||||
│ └── {hash[0:2]}/
|
||||
│ └── {hash[2:4]}/
|
||||
│ └── {full-hash} # Compressed+encrypted blob
|
||||
│
|
||||
└── metadata/
|
||||
└── {remote-key}/
|
||||
├── db.zst.age # Encrypted binary SQLite database
|
||||
└── manifest.json.zst # Blob list (for pruning/verification)
|
||||
```
|
||||
|
||||
A destination that answers a look-up of `vaultik-destination.txt` with not found
|
||||
is treated as not present while the local index holds snapshots stored there
|
||||
(`checkDestinationMarker` in `internal/vaultik/destination_marker.go`):
|
||||
`snapshot create` refuses to write to it, `prune`, `snapshot purge` and
|
||||
`remote nuke` fail, and `snapshot list` and `snapshot remove` behave as for a
|
||||
destination that cannot be listed. This keeps those commands from taking an
|
||||
unplugged volume's empty mount point for a destination whose snapshots are all
|
||||
gone. When the look-up fails for any reason other than not found, for example
|
||||
when S3 refuses it to credentials that allow only PUT, the check is skipped, so
|
||||
a host with such credentials does not notice an emptied destination; see
|
||||
[docs/REPOSTRUCTURE.md](REPOSTRUCTURE.md#marker-file-vaultik-destinationtxt).
|
||||
The `file://` backend never creates its destination directory, so a write to a
|
||||
missing one fails.
|
||||
|
||||
The `{remote-key}` directory name is a one-way double SHA-256 hash of the human
|
||||
snapshot ID, so the human ID (hostname, snapshot name, timestamp) is never
|
||||
written to the store as a directory name. See
|
||||
[docs/REPOSTRUCTURE.md](REPOSTRUCTURE.md#remote-key-derivation) for the
|
||||
derivation and a worked example.
|
||||
|
||||
## Thread Safety
|
||||
|
||||
- `Packer`: Thread-safe via mutex. Multiple goroutines can call `AddChunk()`.
|
||||
- `Scanner`: Uses `packerMu` mutex to coordinate blob finalization.
|
||||
- `Database`: Single-writer mode (`MaxOpenConns=1`) ensures SQLite thread
|
||||
safety.
|
||||
- `Repositories.WithTx()`: Handles transaction lifecycle automatically.
|
||||
Reference in new issue
Block a user