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8d2ea50674
| Author | SHA1 | Date | |
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8d2ea50674 |
@@ -393,6 +393,20 @@ All four subcommands operate on a single SQLite database file:
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content BLOB NOT NULL -- raw 32-byte SHA-256; whole file under 100 MiB, else samples
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content BLOB NOT NULL -- raw 32-byte SHA-256; whole file under 100 MiB, else samples
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) WITHOUT ROWID;
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) WITHOUT ROWID;
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CREATE INDEX files_signature ON files (size, head, tail, content);
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CREATE INDEX files_signature ON files (size, head, tail, content);
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CREATE TABLE totals (
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records INTEGER NOT NULL, -- number of records in files
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size INTEGER NOT NULL -- sizes of all records in files added up
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);
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INSERT INTO totals (records, size) VALUES (0, 0);
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CREATE TRIGGER totals_after_insert AFTER INSERT ON files BEGIN
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UPDATE totals SET records = records + 1, size = size + NEW.size;
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END;
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CREATE TRIGGER totals_after_delete AFTER DELETE ON files BEGIN
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UPDATE totals SET records = records - 1, size = size - OLD.size;
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END;
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CREATE TRIGGER totals_after_update AFTER UPDATE OF size ON files BEGIN
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UPDATE totals SET size = size + NEW.size - OLD.size;
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END;
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```
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```
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Paths are stored as BLOBs because Unix paths are raw bytes, not guaranteed
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Paths are stored as BLOBs because Unix paths are raw bytes, not guaranteed
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@@ -406,6 +420,13 @@ All four subcommands operate on a single SQLite database file:
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`files_signature` index lets `report` read the records in signature order
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`files_signature` index lets `report` read the records in signature order
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without sorting the table.
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without sorting the table.
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`totals` holds one row: the number of records in `files` and the sum of
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their sizes. Its three triggers keep that row current. Each runs in the
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transaction of the change to `files` that fires it, so the row and the
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records always agree. `info` and the progress displays read the number of
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records from this row. Counting them in `files` would read every record,
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which takes minutes on a database of tens of millions.
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### Duplicate detection
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### Duplicate detection
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Two files are duplicates when they have the same size and the same three hashes.
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Two files are duplicates when they have the same size and the same three hashes.
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@@ -688,14 +709,14 @@ Processing:
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database state.
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database state.
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`report` runs in two phases, each with its own progress display on stderr (see
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`report` runs in two phases, each with its own progress display on stderr (see
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"Progress"): `open` opens the database; `read` counts the records, then reads
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"Progress"): `open` opens the database; `read` gets the number of records from
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them in signature order, largest size first. That is the order of the
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`totals`, then reads the records in signature order, largest size first. That is
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`files_signature` index read backwards, so SQLite sorts nothing and returns the
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the order of the `files_signature` index read backwards, so SQLite sorts nothing
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first record at once. The records sharing a signature come together, and so do
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and returns the first record at once. The records sharing a signature come
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the records of one size, so `report` holds only the duplicate groups of the size
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together, and so do the records of one size, so `report` holds only the
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it is reading, and writes them, ordered by `first` path, once it reaches a
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duplicate groups of the size it is reading, and writes them, ordered by `first`
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smaller size. Its memory holds at most the duplicate paths of one size at a
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path, once it reaches a smaller size. Its memory holds at most the duplicate
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time, never every record.
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paths of one size at a time, never every record.
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#### Report output format
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#### Report output format
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@@ -769,10 +790,10 @@ Processing:
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ascending. Output must be fully deterministic for a given input.
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ascending. Output must be fully deterministic for a given input.
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`trees` runs in four phases, each with its own progress display on stderr (see
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`trees` runs in four phases, each with its own progress display on stderr (see
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"Progress"): `open` opens the database; `read` counts the records, then reads
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"Progress"): `open` opens the database; `read` gets the number of records from
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them in path order, building the hierarchy and computing the digests as it goes;
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`totals`, then reads the records in path order, building the hierarchy and
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`group` groups the directories by digest and picks the maximal groups; `write`
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computing the digests as it goes; `group` groups the directories by digest and
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writes the groups to stdout.
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picks the maximal groups; `write` writes the groups to stdout.
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#### Trees output format
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#### Trees output format
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@@ -823,11 +844,10 @@ size of recorded files 150000000000000 (136.4 TiB)
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of all records, in bytes, then in human units.
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of all records, in bytes, then in human units.
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`info` runs in two phases, each with its own progress display on stderr (see
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`info` runs in two phases, each with its own progress display on stderr (see
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"Progress"): `open` opens the database; `count` reads the schema version and
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"Progress"): `open` opens the database; `count` reads the schema version and the
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counts the records with one query, a single pass over the table, both in one
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row of `totals` (see "Database") in one read-only transaction, so the numbers
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read-only transaction, so the numbers agree with each other while a scan is
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agree with each other while a scan is committing. `info` writes its lines once
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committing. `info` writes its lines once the `count` display has ended, so on a
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the `count` display has ended, so on a terminal they come after the displays.
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terminal they come after the displays.
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### Progress
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### Progress
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@@ -843,8 +863,9 @@ progress, its elapsed time and its time remaining.
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A scan has four phases (`[1/4] load`, `[2/4] walk`, `[3/4] hash`,
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A scan has four phases (`[1/4] load`, `[2/4] walk`, `[3/4] hash`,
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`[4/4] update`):
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`[4/4] update`):
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- `load` counts the records first, then reads them against that count. While the
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- `load` gets the number of records from `totals` first, then reads the records
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count runs, the display says it is counting the records.
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against that number. Until it has the number, the display says it is counting
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the records.
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- `walk` has no exact total. Its estimate is the number of records the last scan
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- `walk` has no exact total. Its estimate is the number of records the last scan
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left under the operands, known once `load` is done and shown with a `~`. The
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left under the operands, known once `load` is done and shown with a `~`. The
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time remaining is unknown once the walk passes the estimate, and when there
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time remaining is unknown once the walk passes the estimate, and when there
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@@ -857,8 +878,9 @@ A scan has four phases (`[1/4] load`, `[2/4] walk`, `[3/4] hash`,
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- `open` has no total. While it opens the database, waiting on a busy one
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- `open` has no total. While it opens the database, waiting on a busy one
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included, the display says it is opening the database.
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included, the display says it is opening the database.
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- `read` counts the records first, then reads them against that count. While the
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- `read` gets the number of records from `totals` first, then reads the records
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count runs, the display says it is counting the records.
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against that number. Until it has the number, the display says it is counting
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the records.
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- `group` has the directories `read` found as its total, and `write` the
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- `group` has the directories `read` found as its total, and `write` the
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duplicate-tree groups.
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duplicate-tree groups.
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@@ -866,17 +888,16 @@ A scan has four phases (`[1/4] load`, `[2/4] walk`, `[3/4] hash`,
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- `open` has no total. While it opens the database, waiting on a busy one
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- `open` has no total. While it opens the database, waiting on a busy one
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included, the display says it is opening the database.
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included, the display says it is opening the database.
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- `read` counts the records first, then reads them against that count, writing
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- `read` gets the number of records from `totals` first, then reads the records
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the rows to stdout as it goes. While the count runs, the display says it is
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against that number, writing the rows to stdout as it goes. Until it has the
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counting the records.
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number, the display says it is counting the records.
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`info` has two phases (`[1/2] open`, `[2/2] count`, see "`info` mode"):
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`info` has two phases (`[1/2] open`, `[2/2] count`, see "`info` mode"):
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- `open` has no total. While it opens the database, waiting on a busy one
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- `open` has no total. While it opens the database, waiting on a busy one
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included, the display says it is opening the database.
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included, the display says it is opening the database.
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- `count` has no total either, because one query counts everything: the display
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- `count` has no total either, because it reads one row: the display says it is
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says it is counting the records until the query returns, and its time
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counting the records until it has the row, and its time remaining is unknown.
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remaining is unknown.
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Each display is one line holding:
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Each display is one line holding:
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@@ -29,6 +29,12 @@
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# Completed Steps
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# Completed Steps
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- the database keeps the number of records and the sum of their sizes in the one
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row of a `totals` table, which three triggers on `files` keep current. `info`
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reads that row, and so do `scan`'s `load` phase and the `read` phases of
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`report` and `trees` for their totals; no count reads every record any more
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(2026-10-27, https://git.eeqj.de/sneak/sfdupes/issues/146)
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- an operand at or inside a directory named `.zfs` is never scanned, whether
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- an operand at or inside a directory named `.zfs` is never scanned, whether
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given alone or under another operand. `scan` warns about it, counts it as
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given alone or under another operand. `scan` warns about it, counts it as
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skipped and does not walk it (2026-10-26,
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skipped and does not walk it (2026-10-26,
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@@ -69,6 +69,49 @@ const createIndexSQL = `
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CREATE INDEX files_signature ON files (size, head, tail, content)
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CREATE INDEX files_signature ON files (size, head, tail, content)
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`
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`
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// createTotalsSQL creates the totals table, which holds one row: the
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// number of records and the sizes of all records added up. Counting
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// them over files would read every record. The three triggers below
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// keep the row current, in the transaction of each change to files.
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const createTotalsSQL = `
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CREATE TABLE totals (
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records INTEGER NOT NULL,
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size INTEGER NOT NULL
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)
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`
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// insertTotalsSQL adds the one row of totals, for an empty files table.
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const insertTotalsSQL = `
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INSERT INTO totals (records, size) VALUES (0, 0)
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`
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// totalsAfterInsertSQL counts each inserted record into totals.
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const totalsAfterInsertSQL = `
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CREATE TRIGGER totals_after_insert AFTER INSERT ON files BEGIN
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UPDATE totals SET records = records + 1, size = size + NEW.size;
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END
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`
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// totalsAfterDeleteSQL takes each deleted record out of totals.
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const totalsAfterDeleteSQL = `
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CREATE TRIGGER totals_after_delete AFTER DELETE ON files BEGIN
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UPDATE totals SET records = records - 1, size = size - OLD.size;
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END
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`
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// totalsAfterUpdateSQL replaces a record's old size in totals with its
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// new one. scan's upsert of an existing record is such an update.
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const totalsAfterUpdateSQL = `
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CREATE TRIGGER totals_after_update AFTER UPDATE OF size ON files BEGIN
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UPDATE totals SET size = size + NEW.size - OLD.size;
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END
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`
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// recordCountSQL reads the number of records from totals.
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const recordCountSQL = `
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SELECT records FROM totals
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`
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// upsertSQL inserts one file record, replacing any existing record for
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// upsertSQL inserts one file record, replacing any existing record for
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// the same path.
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// the same path.
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const upsertSQL = `
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const upsertSQL = `
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@@ -426,14 +469,14 @@ func createSchema(ctx context.Context, db *sql.DB) error {
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defer func() { _ = tx.Rollback() }()
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defer func() { _ = tx.Rollback() }()
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_, err = tx.ExecContext(ctx, createTableSQL)
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for _, stmt := range []string{
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if err != nil {
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createTableSQL, createIndexSQL, createTotalsSQL, insertTotalsSQL,
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return fmt.Errorf("create schema: %w", err)
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totalsAfterInsertSQL, totalsAfterDeleteSQL, totalsAfterUpdateSQL,
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}
|
} {
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_, err = tx.ExecContext(ctx, stmt)
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_, err = tx.ExecContext(ctx, createIndexSQL)
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if err != nil {
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if err != nil {
|
return fmt.Errorf("create schema: %w", err)
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return fmt.Errorf("create schema: %w", err)
|
}
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}
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}
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_, err = tx.ExecContext(ctx,
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_, err = tx.ExecContext(ctx,
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@@ -480,7 +523,7 @@ func loadFileRows(ctx context.Context, db *sql.DB, total func(n int64),
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var n int64
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var n int64
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err = tx.QueryRowContext(ctx, "SELECT COUNT(*) FROM files").Scan(&n)
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err = tx.QueryRowContext(ctx, recordCountSQL).Scan(&n)
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if err != nil {
|
if err != nil {
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return fmt.Errorf("count records: %w", err)
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return fmt.Errorf("count records: %w", err)
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}
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}
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@@ -556,7 +599,7 @@ func loadSignatureRows(ctx context.Context, db *sql.DB,
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var n int64
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var n int64
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err = tx.QueryRowContext(ctx, "SELECT COUNT(*) FROM files").Scan(&n)
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err = tx.QueryRowContext(ctx, recordCountSQL).Scan(&n)
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if err != nil {
|
if err != nil {
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return fmt.Errorf("count records: %w", err)
|
return fmt.Errorf("count records: %w", err)
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}
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}
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@@ -622,7 +665,7 @@ func (r *scanRec) setHashes(head, tail, content []byte) error {
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func countRecords(ctx context.Context, db *sql.DB) (int64, error) {
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func countRecords(ctx context.Context, db *sql.DB) (int64, error) {
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var n int64
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var n int64
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err := db.QueryRowContext(ctx, "SELECT COUNT(*) FROM files").Scan(&n)
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err := db.QueryRowContext(ctx, recordCountSQL).Scan(&n)
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if err != nil {
|
if err != nil {
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return 0, fmt.Errorf("count records: %w", err)
|
return 0, fmt.Errorf("count records: %w", err)
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}
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}
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@@ -630,12 +673,10 @@ func countRecords(ctx context.Context, db *sql.DB) (int64, error) {
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return n, nil
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return n, nil
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}
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}
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// databaseCountsSQL counts the records and adds up their sizes, in one
|
// databaseCountsSQL reads the number of records and the sizes of all
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// pass over the table. A SUM over no rows is NULL, so on an empty table
|
// records added up from totals.
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// the SUM falls back to 0.
|
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const databaseCountsSQL = `
|
const databaseCountsSQL = `
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SELECT COUNT(*), COALESCE(SUM(size), 0)
|
SELECT records, size FROM totals
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FROM files
|
|
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`
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`
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// databaseCounts is what info reads from the database: its schema
|
// databaseCounts is what info reads from the database: its schema
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+98
-10
@@ -535,17 +535,12 @@ func TestLoadRowsRefuseWrongSizeHash(t *testing.T) {
|
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}
|
}
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}
|
}
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|
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// TestSignatureRowsNeedNoSort checks that SQLite reads signatureRowsSQL
|
// queryPlan returns the detail of each line of SQLite's EXPLAIN QUERY
|
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// from the files_signature index alone, with nothing to sort: the
|
// PLAN for query.
|
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// first record comes at once, so report's read phase counts each
|
func queryPlan(t *testing.T, db *sql.DB, query string) []string {
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// record as it comes rather than waiting on SQLite for all of them.
|
t.Helper()
|
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func TestSignatureRowsNeedNoSort(t *testing.T) {
|
|
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t.Parallel()
|
|
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|
|
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db := openTestDB(t)
|
rows, err := db.QueryContext(t.Context(), "EXPLAIN QUERY PLAN "+query)
|
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|
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rows, err := db.QueryContext(t.Context(),
|
|
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"EXPLAIN QUERY PLAN "+signatureRowsSQL)
|
|
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if err != nil {
|
if err != nil {
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t.Fatal(err)
|
t.Fatal(err)
|
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}
|
}
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@@ -573,12 +568,105 @@ func TestSignatureRowsNeedNoSort(t *testing.T) {
|
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t.Fatal(err)
|
t.Fatal(err)
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}
|
}
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|
|
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|
return plan
|
||||||
|
}
|
||||||
|
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|
// TestSignatureRowsNeedNoSort checks that SQLite reads signatureRowsSQL
|
||||||
|
// from the files_signature index alone, with nothing to sort: the
|
||||||
|
// first record comes at once, so report's read phase counts each
|
||||||
|
// record as it comes rather than waiting on SQLite for all of them.
|
||||||
|
func TestSignatureRowsNeedNoSort(t *testing.T) {
|
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|
t.Parallel()
|
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|
|
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|
db := openTestDB(t)
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|
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|
plan := queryPlan(t, db, signatureRowsSQL)
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|
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want := []string{"SCAN files USING COVERING INDEX files_signature"}
|
want := []string{"SCAN files USING COVERING INDEX files_signature"}
|
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if !slices.Equal(plan, want) {
|
if !slices.Equal(plan, want) {
|
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t.Errorf("query plan = %q, want %q", plan, want)
|
t.Errorf("query plan = %q, want %q", plan, want)
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
// TestCountsReadOnlyTotals checks that SQLite answers each query that
|
||||||
|
// counts the records from the one row of totals. A plan that reads
|
||||||
|
// files or its index reads every record.
|
||||||
|
func TestCountsReadOnlyTotals(t *testing.T) {
|
||||||
|
t.Parallel()
|
||||||
|
|
||||||
|
db := openTestDB(t)
|
||||||
|
|
||||||
|
for _, query := range []string{recordCountSQL, databaseCountsSQL} {
|
||||||
|
plan := queryPlan(t, db, query)
|
||||||
|
|
||||||
|
want := []string{"SCAN totals"}
|
||||||
|
if !slices.Equal(plan, want) {
|
||||||
|
t.Errorf("query plan of %q = %q, want %q", query, plan, want)
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// assertTotalsMatchFiles fails unless the row of totals holds the
|
||||||
|
// number of records and the sizes of all records added up, as counted
|
||||||
|
// over files.
|
||||||
|
func assertTotalsMatchFiles(t *testing.T, db *sql.DB) {
|
||||||
|
t.Helper()
|
||||||
|
|
||||||
|
got, err := readDatabaseCounts(t.Context(), db)
|
||||||
|
if err != nil {
|
||||||
|
t.Fatal(err)
|
||||||
|
}
|
||||||
|
|
||||||
|
var records, size int64
|
||||||
|
|
||||||
|
err = db.QueryRowContext(t.Context(),
|
||||||
|
"SELECT COUNT(*), COALESCE(SUM(size), 0) FROM files").
|
||||||
|
Scan(&records, &size)
|
||||||
|
if err != nil {
|
||||||
|
t.Fatal(err)
|
||||||
|
}
|
||||||
|
|
||||||
|
if got.records != records || got.size != size {
|
||||||
|
t.Errorf("totals = %d records of %d bytes, files holds %d of %d",
|
||||||
|
got.records, got.size, records, size)
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// TestTotalsMatchFiles scans the smoke tree, rescans it after two files
|
||||||
|
// change size, and rescans it after two files are removed. After each
|
||||||
|
// scan the row of totals must agree with files.
|
||||||
|
func TestTotalsMatchFiles(t *testing.T) {
|
||||||
|
t.Parallel()
|
||||||
|
|
||||||
|
dir := buildSmokeTree(t)
|
||||||
|
db := openTestDB(t)
|
||||||
|
|
||||||
|
syncTree(t, db, dir)
|
||||||
|
assertTotalsMatchFiles(t, db)
|
||||||
|
|
||||||
|
writeFile(t, dir, "a/one.bin", pattern(10, 2500))
|
||||||
|
writeFile(t, dir, "t1/f1", pattern(30, 1000))
|
||||||
|
|
||||||
|
if st := syncTree(t, db, dir); st.updated != 2 {
|
||||||
|
t.Fatalf("rescan stats = %+v, want 2 updated", st)
|
||||||
|
}
|
||||||
|
|
||||||
|
assertTotalsMatchFiles(t, db)
|
||||||
|
|
||||||
|
for _, name := range []string{"a/unique.bin", "t2/sub/f2"} {
|
||||||
|
err := os.Remove(filepath.Join(dir, name))
|
||||||
|
if err != nil {
|
||||||
|
t.Fatal(err)
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
if st := syncTree(t, db, dir); st.removed != 2 {
|
||||||
|
t.Fatalf("rescan stats = %+v, want 2 removed", st)
|
||||||
|
}
|
||||||
|
|
||||||
|
assertTotalsMatchFiles(t, db)
|
||||||
|
}
|
||||||
|
|
||||||
func TestApplyChangesRoundTrip(t *testing.T) {
|
func TestApplyChangesRoundTrip(t *testing.T) {
|
||||||
t.Parallel()
|
t.Parallel()
|
||||||
|
|
||||||
|
|||||||
@@ -26,11 +26,11 @@ func infoPhase(name string) string {
|
|||||||
// it. Any database problem, including a missing database, is fatal.
|
// it. Any database problem, including a missing database, is fatal.
|
||||||
//
|
//
|
||||||
// The work runs in two phases, each under a progress display of its
|
// The work runs in two phases, each under a progress display of its
|
||||||
// own on stderr: open (open the database) and count (count the records,
|
// own on stderr: open (open the database) and count (read the number of
|
||||||
// with one query). Each display ends before the next phase starts, and
|
// records and their total size from the totals table). Each display
|
||||||
// before an error is returned to be printed. The details are written
|
// ends before the next phase starts, and before an error is returned
|
||||||
// once the last display has ended, so no display is drawn while they
|
// to be printed. The details are written once the last display has
|
||||||
// are written.
|
// ended, so no display is drawn while they are written.
|
||||||
func runInfo(ctx context.Context, stdout io.Writer) error {
|
func runInfo(ctx context.Context, stdout io.Writer) error {
|
||||||
dbPath, source, err := databasePath()
|
dbPath, source, err := databasePath()
|
||||||
if err != nil {
|
if err != nil {
|
||||||
@@ -56,7 +56,7 @@ func runInfo(ctx context.Context, stdout io.Writer) error {
|
|||||||
|
|
||||||
defer func() { _ = db.Close() }()
|
defer func() { _ = db.Close() }()
|
||||||
|
|
||||||
// One query counts everything, so the phase never has a total.
|
// One row holds both counts, so the phase never has a total.
|
||||||
prog = newProgress(progressParams{
|
prog = newProgress(progressParams{
|
||||||
label: infoPhase("count"), total: -1,
|
label: infoPhase("count"), total: -1,
|
||||||
waitingFor: countingRecords,
|
waitingFor: countingRecords,
|
||||||
|
|||||||
+6
-5
@@ -180,9 +180,9 @@ func capture(t *testing.T, std **os.File) func() string {
|
|||||||
}
|
}
|
||||||
|
|
||||||
// brokenDatabase writes a database that opens cleanly and passes the
|
// brokenDatabase writes a database that opens cleanly and passes the
|
||||||
// schema-version check but has no files table, so the first query
|
// schema-version check but has no tables, so the first query fails
|
||||||
// fails with the database already open: a fatal error on a path that
|
// with the database already open: a fatal error on a path that owns an
|
||||||
// owns an open database. It closes the database the way scan does.
|
// open database. It closes the database the way scan does.
|
||||||
func brokenDatabase(t *testing.T) string {
|
func brokenDatabase(t *testing.T) string {
|
||||||
t.Helper()
|
t.Helper()
|
||||||
|
|
||||||
@@ -265,8 +265,9 @@ func TestRunFatalAfterOpenClosesDatabase(t *testing.T) {
|
|||||||
assertFatalOutput(t, stderr.String(), stdout())
|
assertFatalOutput(t, stderr.String(), stdout())
|
||||||
|
|
||||||
// Proof that the failure happened after the open: only a
|
// Proof that the failure happened after the open: only a
|
||||||
// query against the opened database can report this.
|
// query against the opened database can report this. Each
|
||||||
if !strings.Contains(stderr.String(), "no such table: files") {
|
// subcommand's first query reads totals.
|
||||||
|
if !strings.Contains(stderr.String(), "no such table: totals") {
|
||||||
t.Errorf("stderr = %q, want the failure to come from a "+
|
t.Errorf("stderr = %q, want the failure to come from a "+
|
||||||
"query on the open database", stderr.String())
|
"query on the open database", stderr.String())
|
||||||
}
|
}
|
||||||
|
|||||||
@@ -455,8 +455,8 @@ func (s *scanState) walkableRoots(roots []string, rules walkRules) []string {
|
|||||||
// included, so its display counts against the number of records.
|
// included, so its display counts against the number of records.
|
||||||
func (s *scanState) loadIndex(ctx context.Context, roots []string) error {
|
func (s *scanState) loadIndex(ctx context.Context, roots []string) error {
|
||||||
// Indexing tens of millions of records takes real time; without a
|
// Indexing tens of millions of records takes real time; without a
|
||||||
// display the scan looks hung before the walk begins. Counting them
|
// display the scan looks hung before the walk begins. The number of
|
||||||
// first gives the display its total.
|
// records, read first, gives the display its total.
|
||||||
prog := newProgress(progressParams{
|
prog := newProgress(progressParams{
|
||||||
label: scanPhase("load"), unit: scanUnit, total: -1,
|
label: scanPhase("load"), unit: scanUnit, total: -1,
|
||||||
waitingFor: countingRecords, stalledOn: "db",
|
waitingFor: countingRecords, stalledOn: "db",
|
||||||
|
|||||||
Reference in New Issue
Block a user